Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 RACGAP1P-201ENST00000550663 1879 ntBASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 AC093278.2-201ENST00000564956 2485 ntBASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 AC013488.1-201ENST00000526618 1838 ntBASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CUEDC1Q9NWM3 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 SFTPD-AS1-201ENST00000608229 5001 ntBASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 RNU6-777P-201ENST00000364265 104 ntBASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 RNA5SP152-201ENST00000365184 110 ntBASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 AL583835.1-201ENST00000399570 407 ntBASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 AC096644.2-201ENST00000429278 159 ntBASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 TIMM8BP2-201ENST00000445940 251 ntBASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 AC107399.1-201ENST00000451226 265 ntBASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 AC118758.1-202ENST00000454719 225 ntBASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 AC009567.2-201ENST00000502989 349 ntBASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 GAPDHP62-201ENST00000515313 990 ntBASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 Y_RNA.668-201ENST00000516233 93 ntBASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 AC087752.2-201ENST00000521219 281 ntBASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 OR4R1P-201ENST00000529879 463 ntBASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 OR5B10P-201ENST00000532869 642 ntBASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 ARL1-211ENST00000551828 776 ntTSL 5 BASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 AL162632.2-201ENST00000553933 399 ntBASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 MTCO3P23-201ENST00000561363 289 ntBASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 CYCSP1-201ENST00000604815 315 ntBASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 RNU6-89P-201ENST00000606519 100 ntBASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 AC010149.2-201ENST00000637608 315 ntBASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 USP9YP4-201ENST00000424401 1745 ntBASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.56□□□□□ -1.36
CUEDC1Q9NWM3 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC6.55□□□□□ -1.36
CUEDC1Q9NWM3 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
CUEDC1Q9NWM3 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
CUEDC1Q9NWM3 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CUEDC1Q9NWM3 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CUEDC1Q9NWM3 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.55□□□□□ -1.36
CUEDC1Q9NWM3 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.55□□□□□ -1.36
CUEDC1Q9NWM3 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CUEDC1Q9NWM3 CYP2G2P-201ENST00000594920 1485 ntBASIC6.55□□□□□ -1.36
CUEDC1Q9NWM3 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CUEDC1Q9NWM3 SAGE3P-201ENST00000619800 1635 ntBASIC6.55□□□□□ -1.36
CUEDC1Q9NWM3 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.55□□□□□ -1.36
CUEDC1Q9NWM3 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.55□□□□□ -1.36
CUEDC1Q9NWM3 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CUEDC1Q9NWM3 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.55□□□□□ -1.36
CUEDC1Q9NWM3 SNRPEP3-201ENST00000338402 276 ntBASIC6.55□□□□□ -1.36
CUEDC1Q9NWM3 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CUEDC1Q9NWM3 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CUEDC1Q9NWM3 RNU5E-1-201ENST00000362477 120 ntBASIC6.55□□□□□ -1.36
CUEDC1Q9NWM3 RNU5E-8P-201ENST00000363502 116 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms