Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AC073581.1-201ENST00000519036 575 ntBASIC8.54□□□□□ -1.04
RTN4Q9NQC3 IGLVI-68-201ENST00000519525 345 ntBASIC8.54□□□□□ -1.04
RTN4Q9NQC3 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC8.54□□□□□ -1.04
RTN4Q9NQC3 IGHVIII-82-201ENST00000522058 250 ntBASIC8.54□□□□□ -1.04
RTN4Q9NQC3 PTK2-241ENST00000522950 548 ntTSL 4 BASIC8.54□□□□□ -1.04
RTN4Q9NQC3 AP001804.3-201ENST00000525146 880 ntBASIC8.54□□□□□ -1.04
RTN4Q9NQC3 PGAM1P8-201ENST00000526979 453 ntBASIC8.54□□□□□ -1.04
RTN4Q9NQC3 STH-201ENST00000537309 445 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
RTN4Q9NQC3 AC048344.2-201ENST00000547280 147 ntBASIC8.54□□□□□ -1.04
RTN4Q9NQC3 AC025165.2-201ENST00000549477 699 ntTSL 3 BASIC8.54□□□□□ -1.04
RTN4Q9NQC3 CCDC32-203ENST00000558113 576 ntTSL 3 BASIC8.54□□□□□ -1.04
RTN4Q9NQC3 CCDC32-210ENST00000559911 677 ntTSL 5 BASIC8.54□□□□□ -1.04
RTN4Q9NQC3 CCDC32-212ENST00000560305 557 ntTSL 4 BASIC8.54□□□□□ -1.04
RTN4Q9NQC3 RN7SL785P-201ENST00000578437 253 ntBASIC8.54□□□□□ -1.04
RTN4Q9NQC3 RN7SL697P-201ENST00000582484 299 ntBASIC8.54□□□□□ -1.04
RTN4Q9NQC3 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC8.54□□□□□ -1.04
RTN4Q9NQC3 HIGD1B-205ENST00000591513 547 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
RTN4Q9NQC3 AC020910.2-201ENST00000603635 610 ntBASIC8.54□□□□□ -1.04
RTN4Q9NQC3 AL022238.3-201ENST00000609279 443 ntBASIC8.54□□□□□ -1.04
RTN4Q9NQC3 U2.17-201ENST00000611454 95 ntBASIC8.54□□□□□ -1.04
RTN4Q9NQC3 AC103705.1-201ENST00000619013 241 ntBASIC8.54□□□□□ -1.04
RTN4Q9NQC3 AC012629.3-201ENST00000623397 328 ntBASIC8.54□□□□□ -1.04
RTN4Q9NQC3 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
RTN4Q9NQC3 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
RTN4Q9NQC3 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
RTN4Q9NQC3 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC8.54□□□□□ -1.04
RTN4Q9NQC3 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC8.54□□□□□ -1.04
RTN4Q9NQC3 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
RTN4Q9NQC3 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC8.54□□□□□ -1.04
RTN4Q9NQC3 AL365440.1-201ENST00000436135 2167 ntBASIC8.54□□□□□ -1.04
RTN4Q9NQC3 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
RTN4Q9NQC3 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
RTN4Q9NQC3 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
RTN4Q9NQC3 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
RTN4Q9NQC3 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
RTN4Q9NQC3 AC092070.2-203ENST00000598377 3644 ntBASIC8.53□□□□□ -1.04
RTN4Q9NQC3 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
RTN4Q9NQC3 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
RTN4Q9NQC3 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
RTN4Q9NQC3 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
RTN4Q9NQC3 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC8.53□□□□□ -1.04
RTN4Q9NQC3 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC8.53□□□□□ -1.04
RTN4Q9NQC3 AMELY-201ENST00000215479 802 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
RTN4Q9NQC3 IL37-203ENST00000349806 589 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
RTN4Q9NQC3 RNU6-701P-201ENST00000384059 107 ntBASIC8.53□□□□□ -1.04
RTN4Q9NQC3 SNORA51.8-201ENST00000384234 132 ntBASIC8.53□□□□□ -1.04
RTN4Q9NQC3 TRAJ24-201ENST00000390513 63 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
RTN4Q9NQC3 GSTA10P-201ENST00000412182 576 ntBASIC8.53□□□□□ -1.04
RTN4Q9NQC3 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC8.53□□□□□ -1.04
RTN4Q9NQC3 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC8.53□□□□□ -1.04
RTN4Q9NQC3 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC8.53□□□□□ -1.04
RTN4Q9NQC3 AL008638.1-201ENST00000430468 473 ntTSL 2 BASIC8.53□□□□□ -1.04
RTN4Q9NQC3 H3F3BP1-201ENST00000440551 403 ntBASIC8.53□□□□□ -1.04
RTN4Q9NQC3 SDHCP3-201ENST00000445371 506 ntBASIC8.53□□□□□ -1.04
RTN4Q9NQC3 KDM4A-AS1-205ENST00000453015 647 ntTSL 2 BASIC8.53□□□□□ -1.04
RTN4Q9NQC3 AC092042.1-201ENST00000457115 509 ntTSL 3 BASIC8.53□□□□□ -1.04
RTN4Q9NQC3 AC079168.1-201ENST00000458741 345 ntBASIC8.53□□□□□ -1.04
RTN4Q9NQC3 UBE2Q2P9-201ENST00000490086 202 ntBASIC8.53□□□□□ -1.04
RTN4Q9NQC3 RN7SL388P-201ENST00000498736 339 ntBASIC8.53□□□□□ -1.04
RTN4Q9NQC3 AC055733.3-201ENST00000505214 523 ntBASIC8.53□□□□□ -1.04
RTN4Q9NQC3 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
RTN4Q9NQC3 RNA5SP206-201ENST00000516703 121 ntBASIC8.53□□□□□ -1.04
RTN4Q9NQC3 MTND6P19-201ENST00000519399 524 ntBASIC8.53□□□□□ -1.04
RTN4Q9NQC3 AC090136.1-201ENST00000520009 240 ntBASIC8.53□□□□□ -1.04
RTN4Q9NQC3 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC8.53□□□□□ -1.04
RTN4Q9NQC3 AC091096.1-201ENST00000521955 614 ntTSL 3 BASIC8.53□□□□□ -1.04
RTN4Q9NQC3 ZNF503-AS1-205ENST00000530606 549 ntTSL 4 BASIC8.53□□□□□ -1.04
RTN4Q9NQC3 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC8.53□□□□□ -1.04
RTN4Q9NQC3 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC8.53□□□□□ -1.04
RTN4Q9NQC3 AC126177.3-201ENST00000551839 688 ntBASIC8.53□□□□□ -1.04
RTN4Q9NQC3 AL121603.1-201ENST00000553815 142 ntBASIC8.53□□□□□ -1.04
RTN4Q9NQC3 AL121576.1-201ENST00000556055 276 ntBASIC8.53□□□□□ -1.04
RTN4Q9NQC3 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC8.53□□□□□ -1.04
RTN4Q9NQC3 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC8.53□□□□□ -1.04
RTN4Q9NQC3 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC8.53□□□□□ -1.04
RTN4Q9NQC3 AL670379.4-201ENST00000605279 254 ntBASIC8.53□□□□□ -1.04
RTN4Q9NQC3 Z82243.1-201ENST00000609432 473 ntBASIC8.53□□□□□ -1.04
RTN4Q9NQC3 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC8.53□□□□□ -1.04
RTN4Q9NQC3 AL133351.5-201ENST00000612789 106 ntBASIC8.53□□□□□ -1.04
RTN4Q9NQC3 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC8.53□□□□□ -1.04
RTN4Q9NQC3 LINC01176-202ENST00000628121 716 ntTSL 3 BASIC8.53□□□□□ -1.04
RTN4Q9NQC3 OR7E161P-202ENST00000641994 1033 ntBASIC8.53□□□□□ -1.04
RTN4Q9NQC3 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
RTN4Q9NQC3 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
RTN4Q9NQC3 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
RTN4Q9NQC3 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
RTN4Q9NQC3 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC8.53□□□□□ -1.04
RTN4Q9NQC3 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
RTN4Q9NQC3 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC8.53□□□□□ -1.04
RTN4Q9NQC3 UQCRC2P1-201ENST00000417777 1332 ntBASIC8.53□□□□□ -1.04
RTN4Q9NQC3 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
RTN4Q9NQC3 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
RTN4Q9NQC3 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC8.53□□□□□ -1.04
RTN4Q9NQC3 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
RTN4Q9NQC3 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC8.52□□□□□ -1.05
RTN4Q9NQC3 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC8.52□□□□□ -1.05
RTN4Q9NQC3 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
RTN4Q9NQC3 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC8.52□□□□□ -1.05
RTN4Q9NQC3 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC8.52□□□□□ -1.05
RTN4Q9NQC3 MRPS6P2-201ENST00000381143 370 ntBASIC8.52□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms