Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC099654.2-201ENST00000433031 1980 ntBASIC5.67□□□□□ -1.5
VTA1Q9NP79 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.67□□□□□ -1.5
VTA1Q9NP79 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
VTA1Q9NP79 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
VTA1Q9NP79 AC005005.4-201ENST00000623789 16698 ntBASIC5.67□□□□□ -1.5
VTA1Q9NP79 AP000526.1-201ENST00000603308 1388 ntBASIC5.67□□□□□ -1.5
VTA1Q9NP79 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.66□□□□□ -1.5
VTA1Q9NP79 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
VTA1Q9NP79 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VTA1Q9NP79 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
VTA1Q9NP79 Y_RNA.77-201ENST00000362962 107 ntBASIC5.66□□□□□ -1.5
VTA1Q9NP79 RPS16P5-201ENST00000406501 404 ntBASIC5.66□□□□□ -1.5
VTA1Q9NP79 RN7SKP100-201ENST00000411258 284 ntBASIC5.66□□□□□ -1.5
VTA1Q9NP79 RPS15AP38-201ENST00000413110 372 ntBASIC5.66□□□□□ -1.5
VTA1Q9NP79 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC5.66□□□□□ -1.5
VTA1Q9NP79 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC5.66□□□□□ -1.5
VTA1Q9NP79 P2RY10P2-201ENST00000416730 913 ntBASIC5.66□□□□□ -1.5
VTA1Q9NP79 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC5.66□□□□□ -1.5
VTA1Q9NP79 AL022400.1-201ENST00000423946 935 ntBASIC5.66□□□□□ -1.5
VTA1Q9NP79 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.66□□□□□ -1.5
VTA1Q9NP79 SKP1P3-201ENST00000429280 487 ntBASIC5.66□□□□□ -1.5
VTA1Q9NP79 RPL31P54-201ENST00000429803 370 ntBASIC5.66□□□□□ -1.5
VTA1Q9NP79 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.66□□□□□ -1.5
VTA1Q9NP79 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC5.66□□□□□ -1.5
VTA1Q9NP79 RPL7P59-201ENST00000447700 943 ntBASIC5.66□□□□□ -1.5
VTA1Q9NP79 AC108463.1-201ENST00000450258 347 ntBASIC5.66□□□□□ -1.5
VTA1Q9NP79 AC073387.1-201ENST00000453261 709 ntBASIC5.66□□□□□ -1.5
VTA1Q9NP79 TPTE2P5-203ENST00000458118 728 ntBASIC5.66□□□□□ -1.5
VTA1Q9NP79 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.66□□□□□ -1.5
VTA1Q9NP79 AC010307.1-201ENST00000467206 836 ntBASIC5.66□□□□□ -1.5
VTA1Q9NP79 AC006967.1-201ENST00000467608 589 ntBASIC5.66□□□□□ -1.5
VTA1Q9NP79 AC021146.8-201ENST00000507455 733 ntBASIC5.66□□□□□ -1.5
VTA1Q9NP79 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.66□□□□□ -1.5
VTA1Q9NP79 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.66□□□□□ -1.5
VTA1Q9NP79 MTCO1P30-201ENST00000515244 580 ntBASIC5.66□□□□□ -1.5
VTA1Q9NP79 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC5.66□□□□□ -1.5
VTA1Q9NP79 AP006289.1-201ENST00000538089 277 ntBASIC5.66□□□□□ -1.5
VTA1Q9NP79 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.66□□□□□ -1.5
VTA1Q9NP79 AC018552.1-201ENST00000562099 811 ntBASIC5.66□□□□□ -1.5
VTA1Q9NP79 AC093519.1-201ENST00000566109 298 ntBASIC5.66□□□□□ -1.5
VTA1Q9NP79 TVP23CP2-201ENST00000571473 623 ntBASIC5.66□□□□□ -1.5
VTA1Q9NP79 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.66□□□□□ -1.5
VTA1Q9NP79 AC115085.1-201ENST00000588924 229 ntBASIC5.66□□□□□ -1.5
VTA1Q9NP79 VN1R90P-201ENST00000595717 726 ntBASIC5.66□□□□□ -1.5
VTA1Q9NP79 AC068790.2-201ENST00000602601 557 ntBASIC5.66□□□□□ -1.5
VTA1Q9NP79 AC072039.2-201ENST00000608883 439 ntBASIC5.66□□□□□ -1.5
VTA1Q9NP79 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC5.66□□□□□ -1.5
VTA1Q9NP79 AL136981.2-201ENST00000617319 734 ntBASIC5.66□□□□□ -1.5
VTA1Q9NP79 MIR7641-1-201ENST00000627518 61 ntBASIC5.66□□□□□ -1.5
VTA1Q9NP79 AC026634.1-201ENST00000634369 198 ntBASIC5.66□□□□□ -1.5
VTA1Q9NP79 FP325313.1-201ENST00000638228 703 ntBASIC5.66□□□□□ -1.5
VTA1Q9NP79 MKKS-204ENST00000639674 192 ntBASIC5.66□□□□□ -1.5
VTA1Q9NP79 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
VTA1Q9NP79 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
VTA1Q9NP79 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VTA1Q9NP79 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VTA1Q9NP79 MTND4P34-201ENST00000572715 1371 ntBASIC5.66□□□□□ -1.5
VTA1Q9NP79 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VTA1Q9NP79 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
VTA1Q9NP79 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
VTA1Q9NP79 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
VTA1Q9NP79 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
VTA1Q9NP79 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
VTA1Q9NP79 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
VTA1Q9NP79 SAMMSON-226ENST00000642089 1582 ntBASIC5.65□□□□□ -1.5
VTA1Q9NP79 RN7SKP145-201ENST00000363291 303 ntBASIC5.65□□□□□ -1.5
VTA1Q9NP79 RNU6-1200P-201ENST00000384162 107 ntBASIC5.65□□□□□ -1.5
VTA1Q9NP79 SNORD116-23-201ENST00000384645 92 ntBASIC5.65□□□□□ -1.5
VTA1Q9NP79 AL133264.1-201ENST00000407157 562 ntBASIC5.65□□□□□ -1.5
VTA1Q9NP79 AC119751.6-201ENST00000416712 186 ntBASIC5.65□□□□□ -1.5
VTA1Q9NP79 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.65□□□□□ -1.5
VTA1Q9NP79 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.65□□□□□ -1.5
VTA1Q9NP79 AL513175.1-201ENST00000431492 780 ntBASIC5.65□□□□□ -1.5
VTA1Q9NP79 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
VTA1Q9NP79 GSTA7P-201ENST00000438425 448 ntBASIC5.65□□□□□ -1.5
VTA1Q9NP79 AC092013.1-201ENST00000438795 332 ntBASIC5.65□□□□□ -1.5
VTA1Q9NP79 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.65□□□□□ -1.5
VTA1Q9NP79 MTCO2P7-201ENST00000446518 666 ntBASIC5.65□□□□□ -1.5
VTA1Q9NP79 SLC25A18P1-201ENST00000449385 454 ntBASIC5.65□□□□□ -1.5
VTA1Q9NP79 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
VTA1Q9NP79 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.65□□□□□ -1.5
VTA1Q9NP79 RN7SL346P-201ENST00000491561 294 ntBASIC5.65□□□□□ -1.5
VTA1Q9NP79 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC5.65□□□□□ -1.5
VTA1Q9NP79 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC5.65□□□□□ -1.5
VTA1Q9NP79 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC5.65□□□□□ -1.5
VTA1Q9NP79 RN7SKP31-201ENST00000516354 278 ntBASIC5.65□□□□□ -1.5
VTA1Q9NP79 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.65□□□□□ -1.5
VTA1Q9NP79 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.65□□□□□ -1.5
VTA1Q9NP79 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC5.65□□□□□ -1.5
VTA1Q9NP79 OR5AN2P-201ENST00000534535 896 ntBASIC5.65□□□□□ -1.5
VTA1Q9NP79 AC024909.2-201ENST00000553035 286 ntBASIC5.65□□□□□ -1.5
VTA1Q9NP79 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
VTA1Q9NP79 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.65□□□□□ -1.5
VTA1Q9NP79 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.65□□□□□ -1.5
VTA1Q9NP79 AL031985.2-201ENST00000600955 480 ntBASIC5.65□□□□□ -1.5
VTA1Q9NP79 PSMA6P4-201ENST00000603247 718 ntBASIC5.65□□□□□ -1.5
VTA1Q9NP79 AC020910.3-201ENST00000603701 874 ntBASIC5.65□□□□□ -1.5
VTA1Q9NP79 AC112220.3-201ENST00000605502 502 ntBASIC5.65□□□□□ -1.5
VTA1Q9NP79 AL451086.1-201ENST00000605596 223 ntBASIC5.65□□□□□ -1.5
VTA1Q9NP79 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms