Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
BCAS3Q9H6U6 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.82□□□□□ -1.48
BCAS3Q9H6U6 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
BCAS3Q9H6U6 AL360270.2-201ENST00000562952 5985 ntBASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 CASC19-221ENST00000641309 1382 ntBASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 INTS6P1-201ENST00000504674 2530 ntBASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 ELF2P3-201ENST00000445099 1506 ntBASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 DNM1P47-203ENST00000571780 12667 ntBASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 CIR1P3-201ENST00000405137 479 ntBASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 NCSTNP1-201ENST00000406229 144 ntBASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 RN7SKP114-201ENST00000410327 279 ntBASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 RN7SKP56-201ENST00000410513 331 ntBASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 GPS2P1-201ENST00000411761 986 ntBASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 AC092745.2-202ENST00000411880 369 ntBASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 HMGN1P14-201ENST00000412459 517 ntBASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 AL139128.1-201ENST00000413921 941 ntBASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 AC104837.2-201ENST00000427236 424 ntBASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 AC093716.1-201ENST00000435923 377 ntBASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 AL512286.1-201ENST00000439244 400 ntBASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 RPL31P44-201ENST00000447680 377 ntBASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 MTND5P20-201ENST00000448677 143 ntBASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 AC079168.1-201ENST00000458741 345 ntBASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 RPS3AP41-201ENST00000462701 778 ntBASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 AC128716.1-201ENST00000475129 166 ntBASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 RN7SL814P-201ENST00000487715 300 ntBASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 AC006427.1-201ENST00000514359 712 ntBASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 RN7SKP298-201ENST00000515950 94 ntBASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 AP000676.2-201ENST00000529711 301 ntBASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 AP004247.1-201ENST00000531556 1289 ntBASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 MIR4528-201ENST00000577763 90 ntBASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 AL390838.2-201ENST00000602394 274 ntBASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 AL137072.1-201ENST00000603444 466 ntBASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 MIR6820-201ENST00000611508 62 ntBASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 AC090970.3-201ENST00000612566 866 ntBASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 AC012150.2-201ENST00000621300 544 ntBASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 AC016717.3-201ENST00000624730 554 ntBASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 AC135068.12-201ENST00000637370 931 ntBASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 TEX21P-201ENST00000447107 1476 ntBASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
BCAS3Q9H6U6 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
BCAS3Q9H6U6 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
BCAS3Q9H6U6 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
BCAS3Q9H6U6 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
BCAS3Q9H6U6 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
BCAS3Q9H6U6 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.8□□□□□ -1.48
BCAS3Q9H6U6 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
BCAS3Q9H6U6 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
BCAS3Q9H6U6 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
BCAS3Q9H6U6 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
BCAS3Q9H6U6 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
BCAS3Q9H6U6 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
BCAS3Q9H6U6 HMGB1P5-201ENST00000255320 642 ntBASIC5.8□□□□□ -1.48
BCAS3Q9H6U6 OR10J6P-201ENST00000289731 930 ntBASIC5.8□□□□□ -1.48
BCAS3Q9H6U6 RN7SKP95-201ENST00000362860 303 ntBASIC5.8□□□□□ -1.48
BCAS3Q9H6U6 RNU4-76P-201ENST00000364509 141 ntBASIC5.8□□□□□ -1.48
BCAS3Q9H6U6 Y_RNA.813-201ENST00000364639 102 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms