Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 RNU2-65P-201ENST00000410162 185 ntBASIC4.17□□□□□ -1.74
UBQLN3Q9H347 ELOCP19-201ENST00000411919 318 ntBASIC4.17□□□□□ -1.74
UBQLN3Q9H347 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.17□□□□□ -1.74
UBQLN3Q9H347 AL450992.3-201ENST00000413192 568 ntBASIC4.17□□□□□ -1.74
UBQLN3Q9H347 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
UBQLN3Q9H347 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
UBQLN3Q9H347 PDSS1P1-201ENST00000422953 1114 ntBASIC4.17□□□□□ -1.74
UBQLN3Q9H347 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC4.17□□□□□ -1.74
UBQLN3Q9H347 CENPIP1-201ENST00000425713 902 ntBASIC4.17□□□□□ -1.74
UBQLN3Q9H347 AC011242.1-201ENST00000433596 1158 ntBASIC4.17□□□□□ -1.74
UBQLN3Q9H347 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.17□□□□□ -1.74
UBQLN3Q9H347 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.17□□□□□ -1.74
UBQLN3Q9H347 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
UBQLN3Q9H347 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC4.17□□□□□ -1.74
UBQLN3Q9H347 Z95152.1-201ENST00000453556 656 ntBASIC4.17□□□□□ -1.74
UBQLN3Q9H347 MRPL35P4-201ENST00000453682 566 ntBASIC4.17□□□□□ -1.74
UBQLN3Q9H347 ISCUP1-201ENST00000454451 448 ntBASIC4.17□□□□□ -1.74
UBQLN3Q9H347 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.17□□□□□ -1.74
UBQLN3Q9H347 AC096992.1-201ENST00000459808 709 ntBASIC4.17□□□□□ -1.74
UBQLN3Q9H347 AC012158.1-204ENST00000483430 465 ntBASIC4.17□□□□□ -1.74
UBQLN3Q9H347 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.17□□□□□ -1.74
UBQLN3Q9H347 CEACAMP10-202ENST00000495431 496 ntBASIC4.17□□□□□ -1.74
UBQLN3Q9H347 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.17□□□□□ -1.74
UBQLN3Q9H347 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.17□□□□□ -1.74
UBQLN3Q9H347 RAB9BP1-201ENST00000519581 626 ntBASIC4.17□□□□□ -1.74
UBQLN3Q9H347 AC090151.1-201ENST00000520784 730 ntBASIC4.17□□□□□ -1.74
UBQLN3Q9H347 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.17□□□□□ -1.74
UBQLN3Q9H347 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.17□□□□□ -1.74
UBQLN3Q9H347 AP000827.1-201ENST00000527814 258 ntBASIC4.17□□□□□ -1.74
UBQLN3Q9H347 HIGD1AP5-201ENST00000529959 259 ntBASIC4.17□□□□□ -1.74
UBQLN3Q9H347 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.17□□□□□ -1.74
UBQLN3Q9H347 AC067852.4-201ENST00000590314 478 ntBASIC4.17□□□□□ -1.74
UBQLN3Q9H347 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.17□□□□□ -1.74
UBQLN3Q9H347 AC023762.1-201ENST00000603280 584 ntBASIC4.17□□□□□ -1.74
UBQLN3Q9H347 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.17□□□□□ -1.74
UBQLN3Q9H347 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.17□□□□□ -1.74
UBQLN3Q9H347 BNIP3P4-201ENST00000604946 565 ntBASIC4.17□□□□□ -1.74
UBQLN3Q9H347 AC124016.2-201ENST00000610058 665 ntBASIC4.17□□□□□ -1.74
UBQLN3Q9H347 AL353726.1-201ENST00000614041 1000 ntBASIC4.17□□□□□ -1.74
UBQLN3Q9H347 AL133243.1-201ENST00000614487 366 ntBASIC4.17□□□□□ -1.74
UBQLN3Q9H347 AC009452.1-201ENST00000640823 606 ntBASIC4.17□□□□□ -1.74
UBQLN3Q9H347 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
UBQLN3Q9H347 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
UBQLN3Q9H347 AC108467.2-201ENST00000617640 1597 ntBASIC4.17□□□□□ -1.74
UBQLN3Q9H347 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.17□□□□□ -1.74
UBQLN3Q9H347 AL391684.1-202ENST00000641293 1636 ntBASIC4.17□□□□□ -1.74
UBQLN3Q9H347 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.17□□□□□ -1.74
UBQLN3Q9H347 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
UBQLN3Q9H347 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.16□□□□□ -1.74
UBQLN3Q9H347 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
UBQLN3Q9H347 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
UBQLN3Q9H347 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
UBQLN3Q9H347 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
UBQLN3Q9H347 RNU5B-1-201ENST00000363286 116 ntBASIC4.16□□□□□ -1.74
UBQLN3Q9H347 MIR659-201ENST00000384963 97 ntBASIC4.16□□□□□ -1.74
UBQLN3Q9H347 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
UBQLN3Q9H347 RNU6-1000P-201ENST00000391066 106 ntBASIC4.16□□□□□ -1.74
UBQLN3Q9H347 RNU6-932P-201ENST00000391108 106 ntBASIC4.16□□□□□ -1.74
UBQLN3Q9H347 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.16□□□□□ -1.74
UBQLN3Q9H347 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.16□□□□□ -1.74
UBQLN3Q9H347 UBE2V1P9-201ENST00000414760 368 ntBASIC4.16□□□□□ -1.74
UBQLN3Q9H347 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.16□□□□□ -1.74
UBQLN3Q9H347 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC4.16□□□□□ -1.74
UBQLN3Q9H347 OR5AW1P-201ENST00000426334 1006 ntBASIC4.16□□□□□ -1.74
UBQLN3Q9H347 RWDD4P2-201ENST00000426392 563 ntBASIC4.16□□□□□ -1.74
UBQLN3Q9H347 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.16□□□□□ -1.74
UBQLN3Q9H347 HMGB1P45-201ENST00000435986 653 ntBASIC4.16□□□□□ -1.74
UBQLN3Q9H347 OR51B8P-201ENST00000449892 769 ntBASIC4.16□□□□□ -1.74
UBQLN3Q9H347 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.16□□□□□ -1.74
UBQLN3Q9H347 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.16□□□□□ -1.74
UBQLN3Q9H347 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.16□□□□□ -1.74
UBQLN3Q9H347 AC073522.1-201ENST00000483312 377 ntBASIC4.16□□□□□ -1.74
UBQLN3Q9H347 HMGB1P21-201ENST00000502313 581 ntBASIC4.16□□□□□ -1.74
UBQLN3Q9H347 AC092593.2-201ENST00000513866 913 ntBASIC4.16□□□□□ -1.74
UBQLN3Q9H347 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.16□□□□□ -1.74
UBQLN3Q9H347 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.16□□□□□ -1.74
UBQLN3Q9H347 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.16□□□□□ -1.74
UBQLN3Q9H347 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC4.16□□□□□ -1.74
UBQLN3Q9H347 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.16□□□□□ -1.74
UBQLN3Q9H347 AL442163.2-201ENST00000553912 710 ntBASIC4.16□□□□□ -1.74
UBQLN3Q9H347 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.16□□□□□ -1.74
UBQLN3Q9H347 CYP2C60P-201ENST00000566088 139 ntBASIC4.16□□□□□ -1.74
UBQLN3Q9H347 AC011492.1-201ENST00000600023 315 ntBASIC4.16□□□□□ -1.74
UBQLN3Q9H347 AL158196.1-201ENST00000616786 434 ntBASIC4.16□□□□□ -1.74
UBQLN3Q9H347 LINC00901.1-201ENST00000617252 152 ntBASIC4.16□□□□□ -1.74
UBQLN3Q9H347 AL512427.1-201ENST00000618593 349 ntBASIC4.16□□□□□ -1.74
UBQLN3Q9H347 AC022079.2-201ENST00000619739 566 ntBASIC4.16□□□□□ -1.74
UBQLN3Q9H347 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.16□□□□□ -1.74
UBQLN3Q9H347 AC007275.1-201ENST00000621243 671 ntBASIC4.16□□□□□ -1.74
UBQLN3Q9H347 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.16□□□□□ -1.74
UBQLN3Q9H347 AC092608.3-201ENST00000625017 386 ntBASIC4.16□□□□□ -1.74
UBQLN3Q9H347 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.16□□□□□ -1.74
UBQLN3Q9H347 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.16□□□□□ -1.74
UBQLN3Q9H347 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.16□□□□□ -1.74
UBQLN3Q9H347 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
UBQLN3Q9H347 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
UBQLN3Q9H347 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
UBQLN3Q9H347 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
UBQLN3Q9H347 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.16□□□□□ -1.74
UBQLN3Q9H347 MTND4P9-201ENST00000507819 1346 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms