Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 RPL23AP35-201ENST00000451906 501 ntBASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 DDX39BP2-208ENST00000453923 258 ntBASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 AC108161.1-201ENST00000461060 402 ntBASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 RPS21P4-201ENST00000487122 248 ntBASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 AC097173.1-201ENST00000505862 819 ntBASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 AC106872.4-201ENST00000510050 523 ntBASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 RNU6-513P-201ENST00000516104 104 ntBASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 AC024940.3-201ENST00000538551 316 ntBASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 REXO2-218ENST00000544827 880 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 AKIRIN1P1-201ENST00000547384 544 ntBASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 TRAV15-201ENST00000556680 249 ntBASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 AC011840.5-201ENST00000582125 771 ntBASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 AC091946.2-201ENST00000606105 291 ntBASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 AC116447.1-201ENST00000613153 453 ntBASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 AC007494.3-201ENST00000624660 743 ntBASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 AL390862.1-201ENST00000635467 1469 ntBASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 AC063976.2-201ENST00000425667 3556 ntBASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 AC011493.1-201ENST00000596753 1632 ntBASIC5.05□□□□□ -1.6
TRIM54Q9BYV2 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 AL731566.1-201ENST00000620490 1937 ntBASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 RNA5SP183-201ENST00000362452 119 ntBASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 RN7SKP162-201ENST00000363605 345 ntBASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 MTCO3P31-201ENST00000405526 789 ntBASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 SNORA11B-201ENST00000408175 129 ntBASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 MIR1182-201ENST00000408363 97 ntBASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 AC068533.2-201ENST00000411872 306 ntBASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 AC062016.2-201ENST00000420950 676 ntBASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 CHEK2P5-201ENST00000423877 246 ntBASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 AL031736.2-201ENST00000426573 787 ntBASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 IFNNP1-201ENST00000429219 553 ntBASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 MTND2P28-201ENST00000457540 1044 ntBASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 RN7SL443P-201ENST00000464331 290 ntBASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 RN7SL101P-201ENST00000496350 279 ntBASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 AC005178.1-201ENST00000508392 440 ntBASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 ARL2BPP5-201ENST00000523141 481 ntBASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 AC127381.1-201ENST00000555979 939 ntBASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 NDUFB4P11-201ENST00000560510 395 ntBASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 AL512347.1-201ENST00000566420 503 ntBASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 AP005136.1-201ENST00000579765 429 ntBASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 AC090527.3-201ENST00000619041 548 ntBASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms