Protein–RNA interactions for Protein: Q99956

DUSP9, Dual specificity protein phosphatase 9, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP9Q99956 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.34□□□□□ -1.39
DUSP9Q99956 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.34□□□□□ -1.39
DUSP9Q99956 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
DUSP9Q99956 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
DUSP9Q99956 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
DUSP9Q99956 AC019072.1-201ENST00000604535 1551 ntBASIC6.34□□□□□ -1.39
DUSP9Q99956 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
DUSP9Q99956 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
DUSP9Q99956 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
DUSP9Q99956 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
DUSP9Q99956 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.33□□□□□ -1.4
DUSP9Q99956 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
DUSP9Q99956 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
DUSP9Q99956 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
DUSP9Q99956 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
DUSP9Q99956 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC6.33□□□□□ -1.4
DUSP9Q99956 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
DUSP9Q99956 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.33□□□□□ -1.4
DUSP9Q99956 RN7SKP269-201ENST00000365545 319 ntBASIC6.33□□□□□ -1.4
DUSP9Q99956 MIR130A-201ENST00000385274 89 ntBASIC6.33□□□□□ -1.4
DUSP9Q99956 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
DUSP9Q99956 SNORD115.1-201ENST00000391109 76 ntBASIC6.33□□□□□ -1.4
DUSP9Q99956 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
DUSP9Q99956 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.33□□□□□ -1.4
DUSP9Q99956 GSTA9P-201ENST00000406231 611 ntBASIC6.33□□□□□ -1.4
DUSP9Q99956 AL354868.1-201ENST00000417077 482 ntBASIC6.33□□□□□ -1.4
DUSP9Q99956 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.33□□□□□ -1.4
DUSP9Q99956 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.33□□□□□ -1.4
DUSP9Q99956 AL031736.2-201ENST00000426573 787 ntBASIC6.33□□□□□ -1.4
DUSP9Q99956 AC099670.2-201ENST00000435130 321 ntBASIC6.33□□□□□ -1.4
DUSP9Q99956 RPL23AP74-201ENST00000437246 471 ntBASIC6.33□□□□□ -1.4
DUSP9Q99956 ELOCP10-201ENST00000440624 327 ntBASIC6.33□□□□□ -1.4
DUSP9Q99956 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.33□□□□□ -1.4
DUSP9Q99956 Z99127.3-201ENST00000448158 395 ntBASIC6.33□□□□□ -1.4
DUSP9Q99956 OR7E116P-201ENST00000448529 957 ntBASIC6.33□□□□□ -1.4
DUSP9Q99956 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC6.33□□□□□ -1.4
DUSP9Q99956 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC6.33□□□□□ -1.4
DUSP9Q99956 AC099563.1-201ENST00000456086 418 ntBASIC6.33□□□□□ -1.4
DUSP9Q99956 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC6.33□□□□□ -1.4
DUSP9Q99956 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC6.33□□□□□ -1.4
DUSP9Q99956 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.33□□□□□ -1.4
DUSP9Q99956 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.33□□□□□ -1.4
DUSP9Q99956 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
DUSP9Q99956 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
DUSP9Q99956 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
DUSP9Q99956 AC018797.3-201ENST00000513388 1241 ntBASIC6.33□□□□□ -1.4
DUSP9Q99956 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC6.33□□□□□ -1.4
DUSP9Q99956 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.33□□□□□ -1.4
DUSP9Q99956 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC6.33□□□□□ -1.4
DUSP9Q99956 AC137627.1-201ENST00000545761 289 ntBASIC6.33□□□□□ -1.4
DUSP9Q99956 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC6.33□□□□□ -1.4
DUSP9Q99956 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC6.33□□□□□ -1.4
DUSP9Q99956 AL133457.1-201ENST00000564251 987 ntBASIC6.33□□□□□ -1.4
DUSP9Q99956 AL391840.1-201ENST00000571144 367 ntBASIC6.33□□□□□ -1.4
DUSP9Q99956 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.33□□□□□ -1.4
DUSP9Q99956 AC006504.3-201ENST00000586818 523 ntBASIC6.33□□□□□ -1.4
DUSP9Q99956 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC6.33□□□□□ -1.4
DUSP9Q99956 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.33□□□□□ -1.4
DUSP9Q99956 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.33□□□□□ -1.4
DUSP9Q99956 AC027243.2-201ENST00000602530 724 ntBASIC6.33□□□□□ -1.4
DUSP9Q99956 AC011451.2-201ENST00000604303 598 ntBASIC6.33□□□□□ -1.4
DUSP9Q99956 ELOCP34-201ENST00000604436 327 ntBASIC6.33□□□□□ -1.4
DUSP9Q99956 Z95327.3-201ENST00000610385 572 ntBASIC6.33□□□□□ -1.4
DUSP9Q99956 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.33□□□□□ -1.4
DUSP9Q99956 AC068722.2-201ENST00000618734 544 ntBASIC6.33□□□□□ -1.4
DUSP9Q99956 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC6.33□□□□□ -1.4
DUSP9Q99956 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
DUSP9Q99956 AC010401.2-201ENST00000575137 4934 ntBASIC6.33□□□□□ -1.4
DUSP9Q99956 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
DUSP9Q99956 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
DUSP9Q99956 SLC2A3P1-201ENST00000519666 1451 ntBASIC6.33□□□□□ -1.4
DUSP9Q99956 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
DUSP9Q99956 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
DUSP9Q99956 CR848007.1-201ENST00000442354 1699 ntBASIC6.33□□□□□ -1.4
DUSP9Q99956 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
DUSP9Q99956 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
DUSP9Q99956 AC006206.1-201ENST00000544842 3387 ntBASIC6.32□□□□□ -1.4
DUSP9Q99956 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
DUSP9Q99956 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
DUSP9Q99956 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
DUSP9Q99956 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
DUSP9Q99956 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
DUSP9Q99956 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
DUSP9Q99956 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.32□□□□□ -1.4
DUSP9Q99956 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
DUSP9Q99956 RNU1-150P-201ENST00000362491 162 ntBASIC6.32□□□□□ -1.4
DUSP9Q99956 Y_RNA.372-201ENST00000365599 102 ntBASIC6.32□□□□□ -1.4
DUSP9Q99956 Y_RNA.450-201ENST00000384198 113 ntBASIC6.32□□□□□ -1.4
DUSP9Q99956 RNU11-201ENST00000387069 134 ntBASIC6.32□□□□□ -1.4
DUSP9Q99956 RNU6-952P-201ENST00000391164 108 ntBASIC6.32□□□□□ -1.4
DUSP9Q99956 FCF1P10-201ENST00000407590 479 ntBASIC6.32□□□□□ -1.4
DUSP9Q99956 AC096921.1-201ENST00000411661 375 ntBASIC6.32□□□□□ -1.4
DUSP9Q99956 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.32□□□□□ -1.4
DUSP9Q99956 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.32□□□□□ -1.4
DUSP9Q99956 RPL6P29-201ENST00000414863 865 ntBASIC6.32□□□□□ -1.4
DUSP9Q99956 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC6.32□□□□□ -1.4
DUSP9Q99956 MTCO3P18-201ENST00000440206 761 ntBASIC6.32□□□□□ -1.4
DUSP9Q99956 GAPDHP17-201ENST00000449858 1001 ntBASIC6.32□□□□□ -1.4
DUSP9Q99956 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC6.32□□□□□ -1.4
DUSP9Q99956 AL359385.1-201ENST00000456509 365 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms