Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC3.99□□□□□ -1.77
SSX3Q99909 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
SSX3Q99909 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC3.99□□□□□ -1.77
SSX3Q99909 MTCO1P6-201ENST00000481192 1384 ntBASIC3.99□□□□□ -1.77
SSX3Q99909 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC3.99□□□□□ -1.77
SSX3Q99909 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SSX3Q99909 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.99□□□□□ -1.77
SSX3Q99909 IQCB2P-201ENST00000401788 1633 ntBASIC3.99□□□□□ -1.77
SSX3Q99909 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SSX3Q99909 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SSX3Q99909 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.98□□□□□ -1.77
SSX3Q99909 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SSX3Q99909 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC3.98□□□□□ -1.77
SSX3Q99909 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SSX3Q99909 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SSX3Q99909 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.98□□□□□ -1.77
SSX3Q99909 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SSX3Q99909 ASNSP1-204ENST00000641977 1664 ntBASIC3.98□□□□□ -1.77
SSX3Q99909 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
SSX3Q99909 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.98□□□□□ -1.77
SSX3Q99909 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SSX3Q99909 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SSX3Q99909 XIAPP3-201ENST00000312918 795 ntBASIC3.98□□□□□ -1.77
SSX3Q99909 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SSX3Q99909 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
SSX3Q99909 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC3.98□□□□□ -1.77
SSX3Q99909 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
SSX3Q99909 UBE2V1P9-201ENST00000414760 368 ntBASIC3.98□□□□□ -1.77
SSX3Q99909 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC3.98□□□□□ -1.77
SSX3Q99909 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.98□□□□□ -1.77
SSX3Q99909 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.98□□□□□ -1.77
SSX3Q99909 AL391219.1-201ENST00000422570 483 ntBASIC3.98□□□□□ -1.77
SSX3Q99909 FABP7P1-201ENST00000424004 391 ntBASIC3.98□□□□□ -1.77
SSX3Q99909 AP001324.1-201ENST00000428553 399 ntBASIC3.98□□□□□ -1.77
SSX3Q99909 RPL7P4-203ENST00000430239 730 ntBASIC3.98□□□□□ -1.77
SSX3Q99909 ARL6IP1P2-201ENST00000431356 563 ntBASIC3.98□□□□□ -1.77
SSX3Q99909 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.98□□□□□ -1.77
SSX3Q99909 AL645931.1-201ENST00000439737 410 ntBASIC3.98□□□□□ -1.77
SSX3Q99909 AC002542.1-201ENST00000440683 193 ntBASIC3.98□□□□□ -1.77
SSX3Q99909 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC3.98□□□□□ -1.77
SSX3Q99909 SLC25A18P1-201ENST00000449385 454 ntBASIC3.98□□□□□ -1.77
SSX3Q99909 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.98□□□□□ -1.77
SSX3Q99909 OR51B8P-201ENST00000449892 769 ntBASIC3.98□□□□□ -1.77
SSX3Q99909 RHEBP2-201ENST00000450289 600 ntBASIC3.98□□□□□ -1.77
SSX3Q99909 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.98□□□□□ -1.77
SSX3Q99909 AC009963.2-201ENST00000453431 138 ntBASIC3.98□□□□□ -1.77
SSX3Q99909 Z95152.1-201ENST00000453556 656 ntBASIC3.98□□□□□ -1.77
SSX3Q99909 AC008280.2-201ENST00000455473 307 ntBASIC3.98□□□□□ -1.77
SSX3Q99909 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.98□□□□□ -1.77
SSX3Q99909 AP000873.1-201ENST00000463987 400 ntBASIC3.98□□□□□ -1.77
SSX3Q99909 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.98□□□□□ -1.77
SSX3Q99909 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC3.98□□□□□ -1.77
SSX3Q99909 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC3.98□□□□□ -1.77
SSX3Q99909 PRELID3BP4-201ENST00000515476 571 ntBASIC3.98□□□□□ -1.77
SSX3Q99909 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC3.98□□□□□ -1.77
SSX3Q99909 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.98□□□□□ -1.77
SSX3Q99909 OR8L1P-201ENST00000534005 955 ntBASIC3.98□□□□□ -1.77
SSX3Q99909 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.98□□□□□ -1.77
SSX3Q99909 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC3.98□□□□□ -1.77
SSX3Q99909 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.98□□□□□ -1.77
SSX3Q99909 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.98□□□□□ -1.77
SSX3Q99909 CENPUP2-201ENST00000555897 1186 ntBASIC3.98□□□□□ -1.77
SSX3Q99909 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.98□□□□□ -1.77
SSX3Q99909 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
SSX3Q99909 ATP5J2P6-201ENST00000565203 266 ntBASIC3.98□□□□□ -1.77
SSX3Q99909 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.98□□□□□ -1.77
SSX3Q99909 AC010735.1-201ENST00000567305 1026 ntBASIC3.98□□□□□ -1.77
SSX3Q99909 CYCSP40-201ENST00000575927 294 ntBASIC3.98□□□□□ -1.77
SSX3Q99909 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.98□□□□□ -1.77
SSX3Q99909 OR1AB1P-201ENST00000585564 761 ntBASIC3.98□□□□□ -1.77
SSX3Q99909 VN1R88P-201ENST00000596787 292 ntBASIC3.98□□□□□ -1.77
SSX3Q99909 YWHAQP7-201ENST00000603536 658 ntBASIC3.98□□□□□ -1.77
SSX3Q99909 AL139395.1-201ENST00000603662 160 ntBASIC3.98□□□□□ -1.77
SSX3Q99909 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.98□□□□□ -1.77
SSX3Q99909 AC018645.2-201ENST00000609151 472 ntBASIC3.98□□□□□ -1.77
SSX3Q99909 AL136295.6-201ENST00000610486 658 ntBASIC3.98□□□□□ -1.77
SSX3Q99909 AL133445.2-201ENST00000611191 527 ntBASIC3.98□□□□□ -1.77
SSX3Q99909 AC004232.3-201ENST00000622977 525 ntBASIC3.98□□□□□ -1.77
SSX3Q99909 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SSX3Q99909 MTND4P8-201ENST00000514997 1362 ntBASIC3.98□□□□□ -1.77
SSX3Q99909 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC3.98□□□□□ -1.77
SSX3Q99909 SDAD1P1-202ENST00000524156 2051 ntBASIC3.98□□□□□ -1.77
SSX3Q99909 SAMMSON-226ENST00000642089 1582 ntBASIC3.97□□□□□ -1.77
SSX3Q99909 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
SSX3Q99909 EEF1A1P42-201ENST00000613436 1331 ntBASIC3.97□□□□□ -1.77
SSX3Q99909 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
SSX3Q99909 AC234772.1-201ENST00000377927 937 ntBASIC3.97□□□□□ -1.77
SSX3Q99909 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.97□□□□□ -1.77
SSX3Q99909 BTBD10P2-201ENST00000404779 676 ntBASIC3.97□□□□□ -1.77
SSX3Q99909 AL355143.1-201ENST00000407101 841 ntBASIC3.97□□□□□ -1.77
SSX3Q99909 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.97□□□□□ -1.77
SSX3Q99909 RPL7P53-201ENST00000421245 739 ntBASIC3.97□□□□□ -1.77
SSX3Q99909 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.97□□□□□ -1.77
SSX3Q99909 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.97□□□□□ -1.77
SSX3Q99909 USP9YP9-201ENST00000429406 715 ntBASIC3.97□□□□□ -1.77
SSX3Q99909 RPS7P2-201ENST00000435134 607 ntBASIC3.97□□□□□ -1.77
SSX3Q99909 HMGB1P45-201ENST00000435986 653 ntBASIC3.97□□□□□ -1.77
SSX3Q99909 AC000041.1-201ENST00000439655 175 ntBASIC3.97□□□□□ -1.77
SSX3Q99909 AL450023.3-201ENST00000440592 271 ntBASIC3.97□□□□□ -1.77
SSX3Q99909 AL929288.2-201ENST00000446368 407 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms