Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 MIR585-201ENST00000384887 94 ntBASIC4.49□□□□□ -1.69
VMP1Q96GC9 RNU6-77P-201ENST00000410554 91 ntBASIC4.49□□□□□ -1.69
VMP1Q96GC9 AC069218.2-201ENST00000411665 344 ntBASIC4.49□□□□□ -1.69
VMP1Q96GC9 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.49□□□□□ -1.69
VMP1Q96GC9 BX510359.2-201ENST00000417920 305 ntBASIC4.49□□□□□ -1.69
VMP1Q96GC9 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.49□□□□□ -1.69
VMP1Q96GC9 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.49□□□□□ -1.69
VMP1Q96GC9 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.49□□□□□ -1.69
VMP1Q96GC9 RPL7P33-201ENST00000444159 742 ntBASIC4.49□□□□□ -1.69
VMP1Q96GC9 RPS26P56-201ENST00000444468 240 ntBASIC4.49□□□□□ -1.69
VMP1Q96GC9 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.49□□□□□ -1.69
VMP1Q96GC9 FABP3P2-201ENST00000453169 399 ntBASIC4.49□□□□□ -1.69
VMP1Q96GC9 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.49□□□□□ -1.69
VMP1Q96GC9 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.49□□□□□ -1.69
VMP1Q96GC9 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.49□□□□□ -1.69
VMP1Q96GC9 RN7SL558P-201ENST00000497468 299 ntBASIC4.49□□□□□ -1.69
VMP1Q96GC9 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.49□□□□□ -1.69
VMP1Q96GC9 TMEM248P1-201ENST00000510579 951 ntBASIC4.49□□□□□ -1.69
VMP1Q96GC9 HIGD1AP3-201ENST00000515857 278 ntBASIC4.49□□□□□ -1.69
VMP1Q96GC9 RNU6-202P-201ENST00000515998 96 ntBASIC4.49□□□□□ -1.69
VMP1Q96GC9 RNU6-709P-201ENST00000517257 104 ntBASIC4.49□□□□□ -1.69
VMP1Q96GC9 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.49□□□□□ -1.69
VMP1Q96GC9 AC133555.2-201ENST00000550213 292 ntBASIC4.49□□□□□ -1.69
VMP1Q96GC9 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.49□□□□□ -1.69
VMP1Q96GC9 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.49□□□□□ -1.69
VMP1Q96GC9 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.49□□□□□ -1.69
VMP1Q96GC9 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.49□□□□□ -1.69
VMP1Q96GC9 MIR4270-201ENST00000581799 70 ntBASIC4.49□□□□□ -1.69
VMP1Q96GC9 AC022726.1-201ENST00000587475 207 ntBASIC4.49□□□□□ -1.69
VMP1Q96GC9 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.49□□□□□ -1.69
VMP1Q96GC9 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.49□□□□□ -1.69
VMP1Q96GC9 AC073091.2-201ENST00000603205 907 ntBASIC4.49□□□□□ -1.69
VMP1Q96GC9 AC007566.2-201ENST00000603642 413 ntBASIC4.49□□□□□ -1.69
VMP1Q96GC9 AC011453.2-201ENST00000603737 729 ntBASIC4.49□□□□□ -1.69
VMP1Q96GC9 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.49□□□□□ -1.69
VMP1Q96GC9 AL022401.1-201ENST00000619498 108 ntBASIC4.49□□□□□ -1.69
VMP1Q96GC9 MIR7154-201ENST00000620673 73 ntBASIC4.49□□□□□ -1.69
VMP1Q96GC9 AL356094.1-201ENST00000624663 1212 ntBASIC4.49□□□□□ -1.69
VMP1Q96GC9 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.49□□□□□ -1.69
VMP1Q96GC9 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VMP1Q96GC9 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
VMP1Q96GC9 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
VMP1Q96GC9 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VMP1Q96GC9 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
VMP1Q96GC9 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.49□□□□□ -1.69
VMP1Q96GC9 AC073055.1-201ENST00000456901 1621 ntBASIC4.49□□□□□ -1.69
VMP1Q96GC9 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VMP1Q96GC9 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.49□□□□□ -1.69
VMP1Q96GC9 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VMP1Q96GC9 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VMP1Q96GC9 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.49□□□□□ -1.69
VMP1Q96GC9 AL122126.1-201ENST00000546905 1318 ntBASIC4.48□□□□□ -1.69
VMP1Q96GC9 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.48□□□□□ -1.69
VMP1Q96GC9 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
VMP1Q96GC9 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VMP1Q96GC9 AL391684.1-202ENST00000641293 1636 ntBASIC4.48□□□□□ -1.69
VMP1Q96GC9 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VMP1Q96GC9 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.48□□□□□ -1.69
VMP1Q96GC9 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.48□□□□□ -1.69
VMP1Q96GC9 AP002784.2-201ENST00000397300 549 ntBASIC4.48□□□□□ -1.69
VMP1Q96GC9 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VMP1Q96GC9 PTP4A1P5-201ENST00000420305 455 ntBASIC4.48□□□□□ -1.69
VMP1Q96GC9 LINC00993-201ENST00000420453 540 ntBASIC4.48□□□□□ -1.69
VMP1Q96GC9 AC004074.1-201ENST00000421810 1063 ntBASIC4.48□□□□□ -1.69
VMP1Q96GC9 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.48□□□□□ -1.69
VMP1Q96GC9 AC093698.1-201ENST00000423843 571 ntBASIC4.48□□□□□ -1.69
VMP1Q96GC9 RPS17P8-201ENST00000434525 335 ntBASIC4.48□□□□□ -1.69
VMP1Q96GC9 AL451139.1-201ENST00000434718 346 ntBASIC4.48□□□□□ -1.69
VMP1Q96GC9 AL929288.2-201ENST00000446368 407 ntBASIC4.48□□□□□ -1.69
VMP1Q96GC9 AC005002.1-201ENST00000447458 540 ntBASIC4.48□□□□□ -1.69
VMP1Q96GC9 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.48□□□□□ -1.69
VMP1Q96GC9 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.48□□□□□ -1.69
VMP1Q96GC9 HMGN2P7-201ENST00000456186 273 ntBASIC4.48□□□□□ -1.69
VMP1Q96GC9 AC006967.1-201ENST00000467608 589 ntBASIC4.48□□□□□ -1.69
VMP1Q96GC9 AC106872.2-201ENST00000494303 480 ntBASIC4.48□□□□□ -1.69
VMP1Q96GC9 AP001086.1-201ENST00000494882 321 ntBASIC4.48□□□□□ -1.69
VMP1Q96GC9 RPS4XP18-201ENST00000495480 763 ntBASIC4.48□□□□□ -1.69
VMP1Q96GC9 AC146944.2-203ENST00000502493 354 ntBASIC4.48□□□□□ -1.69
VMP1Q96GC9 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.48□□□□□ -1.69
VMP1Q96GC9 AC139495.1-202ENST00000513164 354 ntBASIC4.48□□□□□ -1.69
VMP1Q96GC9 OR7H2P-201ENST00000513483 306 ntBASIC4.48□□□□□ -1.69
VMP1Q96GC9 MTCO1P30-201ENST00000515244 580 ntBASIC4.48□□□□□ -1.69
VMP1Q96GC9 RN7SKP276-201ENST00000516242 268 ntBASIC4.48□□□□□ -1.69
VMP1Q96GC9 RNU1-6P-201ENST00000516290 144 ntBASIC4.48□□□□□ -1.69
VMP1Q96GC9 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.48□□□□□ -1.69
VMP1Q96GC9 HMGB1P1-201ENST00000522557 636 ntBASIC4.48□□□□□ -1.69
VMP1Q96GC9 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.48□□□□□ -1.69
VMP1Q96GC9 SOX5P1-201ENST00000524155 1127 ntBASIC4.48□□□□□ -1.69
VMP1Q96GC9 AC124293.1-201ENST00000530034 493 ntBASIC4.48□□□□□ -1.69
VMP1Q96GC9 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.48□□□□□ -1.69
VMP1Q96GC9 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.48□□□□□ -1.69
VMP1Q96GC9 CYCSP28-201ENST00000534284 321 ntBASIC4.48□□□□□ -1.69
VMP1Q96GC9 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VMP1Q96GC9 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.48□□□□□ -1.69
VMP1Q96GC9 AC023824.3-201ENST00000569003 562 ntBASIC4.48□□□□□ -1.69
VMP1Q96GC9 AC007687.1-201ENST00000602704 304 ntBASIC4.48□□□□□ -1.69
VMP1Q96GC9 AL009028.1-201ENST00000604895 802 ntBASIC4.48□□□□□ -1.69
VMP1Q96GC9 AC012531.5-201ENST00000611375 151 ntBASIC4.48□□□□□ -1.69
VMP1Q96GC9 AL353726.1-201ENST00000614041 1000 ntBASIC4.48□□□□□ -1.69
VMP1Q96GC9 AC073592.7-201ENST00000623659 507 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms