Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 AP002512.4-202ENST00000641599 4530 ntBASIC6.04□□□□□ -1.44
PHC3Q8NDX5 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
PHC3Q8NDX5 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.03□□□□□ -1.44
PHC3Q8NDX5 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
PHC3Q8NDX5 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
PHC3Q8NDX5 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.03□□□□□ -1.44
PHC3Q8NDX5 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PHC3Q8NDX5 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
PHC3Q8NDX5 Y_RNA.1-201ENST00000352915 104 ntBASIC6.03□□□□□ -1.44
PHC3Q8NDX5 RNA5SP375-201ENST00000362975 119 ntBASIC6.03□□□□□ -1.44
PHC3Q8NDX5 U8.3-201ENST00000363321 132 ntBASIC6.03□□□□□ -1.44
PHC3Q8NDX5 Y_RNA.295-201ENST00000364918 102 ntBASIC6.03□□□□□ -1.44
PHC3Q8NDX5 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.03□□□□□ -1.44
PHC3Q8NDX5 AC087752.1-201ENST00000391360 558 ntBASIC6.03□□□□□ -1.44
PHC3Q8NDX5 RNU2-18P-201ENST00000411224 162 ntBASIC6.03□□□□□ -1.44
PHC3Q8NDX5 USP9YP27-201ENST00000418455 438 ntBASIC6.03□□□□□ -1.44
PHC3Q8NDX5 AC015977.1-201ENST00000418887 292 ntBASIC6.03□□□□□ -1.44
PHC3Q8NDX5 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC6.03□□□□□ -1.44
PHC3Q8NDX5 RAD23BP1-201ENST00000421404 1227 ntBASIC6.03□□□□□ -1.44
PHC3Q8NDX5 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PHC3Q8NDX5 USP9YP36-201ENST00000424581 829 ntBASIC6.03□□□□□ -1.44
PHC3Q8NDX5 AC130360.1-201ENST00000425489 1117 ntBASIC6.03□□□□□ -1.44
PHC3Q8NDX5 RPSAP65-201ENST00000429660 595 ntBASIC6.03□□□□□ -1.44
PHC3Q8NDX5 RPS3AP54-201ENST00000435535 734 ntBASIC6.03□□□□□ -1.44
PHC3Q8NDX5 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC6.03□□□□□ -1.44
PHC3Q8NDX5 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC6.03□□□□□ -1.44
PHC3Q8NDX5 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC6.03□□□□□ -1.44
PHC3Q8NDX5 AL354710.1-201ENST00000453641 246 ntBASIC6.03□□□□□ -1.44
PHC3Q8NDX5 RPS27AP3-201ENST00000453803 454 ntBASIC6.03□□□□□ -1.44
PHC3Q8NDX5 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PHC3Q8NDX5 AC023598.1-201ENST00000472521 361 ntBASIC6.03□□□□□ -1.44
PHC3Q8NDX5 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PHC3Q8NDX5 MTND1P3-201ENST00000484956 952 ntBASIC6.03□□□□□ -1.44
PHC3Q8NDX5 AC008628.2-201ENST00000502605 298 ntBASIC6.03□□□□□ -1.44
PHC3Q8NDX5 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.03□□□□□ -1.44
PHC3Q8NDX5 PRMT5P1-201ENST00000514351 598 ntBASIC6.03□□□□□ -1.44
PHC3Q8NDX5 RNU6-358P-201ENST00000516564 75 ntBASIC6.03□□□□□ -1.44
PHC3Q8NDX5 RNU6-1003P-201ENST00000517099 105 ntBASIC6.03□□□□□ -1.44
PHC3Q8NDX5 RN7SKP35-201ENST00000517210 151 ntBASIC6.03□□□□□ -1.44
PHC3Q8NDX5 AC130365.2-201ENST00000525882 1201 ntBASIC6.03□□□□□ -1.44
PHC3Q8NDX5 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC6.03□□□□□ -1.44
PHC3Q8NDX5 LSM6P2-201ENST00000552208 177 ntBASIC6.03□□□□□ -1.44
PHC3Q8NDX5 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.03□□□□□ -1.44
PHC3Q8NDX5 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.03□□□□□ -1.44
PHC3Q8NDX5 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.03□□□□□ -1.44
PHC3Q8NDX5 AC008752.3-201ENST00000588113 712 ntBASIC6.03□□□□□ -1.44
PHC3Q8NDX5 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.03□□□□□ -1.44
PHC3Q8NDX5 CKS1BP3-201ENST00000600888 237 ntBASIC6.03□□□□□ -1.44
PHC3Q8NDX5 AL049634.3-201ENST00000604968 457 ntBASIC6.03□□□□□ -1.44
PHC3Q8NDX5 AC016727.1-205ENST00000605437 569 ntBASIC6.03□□□□□ -1.44
PHC3Q8NDX5 AC104260.1-201ENST00000616660 539 ntBASIC6.03□□□□□ -1.44
PHC3Q8NDX5 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
PHC3Q8NDX5 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
PHC3Q8NDX5 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PHC3Q8NDX5 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
PHC3Q8NDX5 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PHC3Q8NDX5 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
PHC3Q8NDX5 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PHC3Q8NDX5 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PHC3Q8NDX5 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.02□□□□□ -1.45
PHC3Q8NDX5 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PHC3Q8NDX5 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.02□□□□□ -1.45
PHC3Q8NDX5 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PHC3Q8NDX5 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PHC3Q8NDX5 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.02□□□□□ -1.45
PHC3Q8NDX5 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.02□□□□□ -1.45
PHC3Q8NDX5 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PHC3Q8NDX5 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
PHC3Q8NDX5 CBX3P1-201ENST00000325243 554 ntBASIC6.02□□□□□ -1.45
PHC3Q8NDX5 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
PHC3Q8NDX5 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
PHC3Q8NDX5 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC6.02□□□□□ -1.45
PHC3Q8NDX5 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
PHC3Q8NDX5 RNU6-1103P-201ENST00000384150 107 ntBASIC6.02□□□□□ -1.45
PHC3Q8NDX5 MT-TL1-201ENST00000386347 75 ntBASIC6.02□□□□□ -1.45
PHC3Q8NDX5 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
PHC3Q8NDX5 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PHC3Q8NDX5 RN7SKP17-201ENST00000411242 351 ntBASIC6.02□□□□□ -1.45
PHC3Q8NDX5 MTCO1P17-201ENST00000411522 491 ntBASIC6.02□□□□□ -1.45
PHC3Q8NDX5 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.02□□□□□ -1.45
PHC3Q8NDX5 AL357752.1-201ENST00000412817 349 ntBASIC6.02□□□□□ -1.45
PHC3Q8NDX5 TPMTP2-201ENST00000414372 726 ntBASIC6.02□□□□□ -1.45
PHC3Q8NDX5 MTCO1P20-201ENST00000425366 358 ntBASIC6.02□□□□□ -1.45
PHC3Q8NDX5 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC6.02□□□□□ -1.45
PHC3Q8NDX5 AC023141.3-201ENST00000436698 278 ntBASIC6.02□□□□□ -1.45
PHC3Q8NDX5 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.02□□□□□ -1.45
PHC3Q8NDX5 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC6.02□□□□□ -1.45
PHC3Q8NDX5 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC6.02□□□□□ -1.45
PHC3Q8NDX5 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC6.02□□□□□ -1.45
PHC3Q8NDX5 AC090142.1-201ENST00000465776 462 ntBASIC6.02□□□□□ -1.45
PHC3Q8NDX5 RPL7AP10-201ENST00000481016 791 ntBASIC6.02□□□□□ -1.45
PHC3Q8NDX5 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.02□□□□□ -1.45
PHC3Q8NDX5 RAD51AP1P1-201ENST00000484195 1001 ntBASIC6.02□□□□□ -1.45
PHC3Q8NDX5 RN7SL170P-201ENST00000487098 295 ntBASIC6.02□□□□□ -1.45
PHC3Q8NDX5 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.02□□□□□ -1.45
PHC3Q8NDX5 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.02□□□□□ -1.45
PHC3Q8NDX5 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC6.02□□□□□ -1.45
PHC3Q8NDX5 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.02□□□□□ -1.45
PHC3Q8NDX5 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC6.02□□□□□ -1.45
PHC3Q8NDX5 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms