Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
XRN1Q8IZH2 AC006484.1-201ENST00000435086 1884 ntBASIC5.06□□□□□ -1.6
XRN1Q8IZH2 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
XRN1Q8IZH2 AC017079.2-201ENST00000416102 485 ntBASIC5.06□□□□□ -1.6
XRN1Q8IZH2 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC5.06□□□□□ -1.6
XRN1Q8IZH2 RPL26P28-201ENST00000451325 435 ntBASIC5.06□□□□□ -1.6
XRN1Q8IZH2 STMN1P2-201ENST00000508435 439 ntBASIC5.06□□□□□ -1.6
XRN1Q8IZH2 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
XRN1Q8IZH2 AC023161.2-201ENST00000551218 780 ntBASIC5.06□□□□□ -1.6
XRN1Q8IZH2 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
XRN1Q8IZH2 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.05□□□□□ -1.6
XRN1Q8IZH2 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
XRN1Q8IZH2 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.05□□□□□ -1.6
XRN1Q8IZH2 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.05□□□□□ -1.6
XRN1Q8IZH2 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.05□□□□□ -1.6
XRN1Q8IZH2 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
XRN1Q8IZH2 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
XRN1Q8IZH2 GNG5P1-201ENST00000255500 204 ntBASIC5.05□□□□□ -1.6
XRN1Q8IZH2 Y_RNA.510-201ENST00000384511 114 ntBASIC5.05□□□□□ -1.6
XRN1Q8IZH2 HMGB3P20-201ENST00000417997 600 ntBASIC5.05□□□□□ -1.6
XRN1Q8IZH2 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC5.05□□□□□ -1.6
XRN1Q8IZH2 RPL5P30-201ENST00000465511 891 ntBASIC5.05□□□□□ -1.6
XRN1Q8IZH2 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.05□□□□□ -1.6
XRN1Q8IZH2 AC017037.1-201ENST00000508460 471 ntBASIC5.05□□□□□ -1.6
XRN1Q8IZH2 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.05□□□□□ -1.6
XRN1Q8IZH2 AC103968.1-201ENST00000557841 573 ntBASIC5.05□□□□□ -1.6
XRN1Q8IZH2 AC006116.10-201ENST00000591836 581 ntBASIC5.05□□□□□ -1.6
XRN1Q8IZH2 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.05□□□□□ -1.6
XRN1Q8IZH2 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
XRN1Q8IZH2 LINC01109-201ENST00000603837 3081 ntBASIC5.05□□□□□ -1.6
XRN1Q8IZH2 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
XRN1Q8IZH2 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.05□□□□□ -1.6
XRN1Q8IZH2 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC5.04□□□□□ -1.6
XRN1Q8IZH2 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
XRN1Q8IZH2 RPL23AP57-201ENST00000332361 466 ntBASIC5.04□□□□□ -1.6
XRN1Q8IZH2 SDCBPP2-201ENST00000424643 885 ntBASIC5.04□□□□□ -1.6
XRN1Q8IZH2 MTCO1P45-201ENST00000431457 267 ntBASIC5.04□□□□□ -1.6
XRN1Q8IZH2 KCTD9P3-201ENST00000434597 1169 ntBASIC5.04□□□□□ -1.6
XRN1Q8IZH2 AC006480.1-201ENST00000449887 378 ntBASIC5.04□□□□□ -1.6
XRN1Q8IZH2 RPS3AP14-201ENST00000483907 780 ntBASIC5.04□□□□□ -1.6
XRN1Q8IZH2 FTH1P11-201ENST00000517577 551 ntBASIC5.04□□□□□ -1.6
XRN1Q8IZH2 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC5.04□□□□□ -1.6
XRN1Q8IZH2 TRAV15-201ENST00000556680 249 ntBASIC5.04□□□□□ -1.6
XRN1Q8IZH2 MIR4672-201ENST00000583126 81 ntBASIC5.04□□□□□ -1.6
XRN1Q8IZH2 AC135507.2-201ENST00000612443 309 ntBASIC5.04□□□□□ -1.6
XRN1Q8IZH2 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
XRN1Q8IZH2 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
XRN1Q8IZH2 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
XRN1Q8IZH2 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
XRN1Q8IZH2 AL353743.1-202ENST00000431724 1695 ntBASIC5.04□□□□□ -1.6
XRN1Q8IZH2 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.03□□□□□ -1.6
XRN1Q8IZH2 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
XRN1Q8IZH2 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
XRN1Q8IZH2 RHOT1P2-201ENST00000366423 333 ntBASIC5.03□□□□□ -1.6
XRN1Q8IZH2 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.03□□□□□ -1.6
XRN1Q8IZH2 AC087650.1-201ENST00000431445 468 ntBASIC5.03□□□□□ -1.6
XRN1Q8IZH2 FTH1P25-201ENST00000447665 469 ntBASIC5.03□□□□□ -1.6
XRN1Q8IZH2 RPL21P6-201ENST00000479171 504 ntBASIC5.03□□□□□ -1.6
XRN1Q8IZH2 AC006445.1-201ENST00000491925 405 ntBASIC5.03□□□□□ -1.6
XRN1Q8IZH2 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.03□□□□□ -1.6
XRN1Q8IZH2 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.03□□□□□ -1.6
XRN1Q8IZH2 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.03□□□□□ -1.6
XRN1Q8IZH2 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
XRN1Q8IZH2 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
XRN1Q8IZH2 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC5.03□□□□□ -1.6
XRN1Q8IZH2 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.03□□□□□ -1.6
XRN1Q8IZH2 RN7SKP53-201ENST00000411337 315 ntBASIC5.03□□□□□ -1.6
XRN1Q8IZH2 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.03□□□□□ -1.6
XRN1Q8IZH2 AC117434.1-201ENST00000419971 836 ntBASIC5.03□□□□□ -1.6
XRN1Q8IZH2 RPF2P1-201ENST00000424137 906 ntBASIC5.03□□□□□ -1.6
XRN1Q8IZH2 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.03□□□□□ -1.6
XRN1Q8IZH2 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.03□□□□□ -1.6
XRN1Q8IZH2 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
XRN1Q8IZH2 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC5.03□□□□□ -1.6
XRN1Q8IZH2 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC5.03□□□□□ -1.6
XRN1Q8IZH2 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.03□□□□□ -1.6
XRN1Q8IZH2 AL033523.1-201ENST00000605153 153 ntBASIC5.03□□□□□ -1.6
XRN1Q8IZH2 AC093535.2-201ENST00000624769 2326 ntBASIC5.03□□□□□ -1.6
XRN1Q8IZH2 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
XRN1Q8IZH2 AC097504.1-201ENST00000515103 2415 ntBASIC5.02□□□□□ -1.61
XRN1Q8IZH2 MFSD8-233ENST00000641482 4860 ntBASIC5.02□□□□□ -1.61
XRN1Q8IZH2 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
XRN1Q8IZH2 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
XRN1Q8IZH2 CPD-202ENST00000543464 4007 ntTSL 2 BASIC5.02□□□□□ -1.61
XRN1Q8IZH2 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
XRN1Q8IZH2 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.02□□□□□ -1.61
XRN1Q8IZH2 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
XRN1Q8IZH2 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
XRN1Q8IZH2 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
XRN1Q8IZH2 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.02□□□□□ -1.61
XRN1Q8IZH2 RN7SKP111-201ENST00000410349 271 ntBASIC5.02□□□□□ -1.61
XRN1Q8IZH2 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC5.02□□□□□ -1.61
XRN1Q8IZH2 AL671855.1-201ENST00000446875 1203 ntBASIC5.02□□□□□ -1.61
XRN1Q8IZH2 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC5.02□□□□□ -1.61
XRN1Q8IZH2 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC5.02□□□□□ -1.61
XRN1Q8IZH2 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.02□□□□□ -1.61
XRN1Q8IZH2 AL669942.2-201ENST00000620352 697 ntBASIC5.02□□□□□ -1.61
XRN1Q8IZH2 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.02□□□□□ -1.61
XRN1Q8IZH2 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
XRN1Q8IZH2 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms