Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PRPF39Q86UA1 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
PRPF39Q86UA1 AC120338.1-201ENST00000625074 1541 ntBASIC4.69□□□□□ -1.66
PRPF39Q86UA1 RPL32P3-201ENST00000359025 275 ntBASIC4.69□□□□□ -1.66
PRPF39Q86UA1 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PRPF39Q86UA1 AL035405.1-201ENST00000400795 710 ntBASIC4.69□□□□□ -1.66
PRPF39Q86UA1 AC004987.3-201ENST00000413879 771 ntBASIC4.69□□□□□ -1.66
PRPF39Q86UA1 P2RY10P2-201ENST00000416730 913 ntBASIC4.69□□□□□ -1.66
PRPF39Q86UA1 UQCRBP1-201ENST00000421129 336 ntBASIC4.69□□□□□ -1.66
PRPF39Q86UA1 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC4.69□□□□□ -1.66
PRPF39Q86UA1 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.69□□□□□ -1.66
PRPF39Q86UA1 ZNF736P1Y-201ENST00000440402 1276 ntBASIC4.69□□□□□ -1.66
PRPF39Q86UA1 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.69□□□□□ -1.66
PRPF39Q86UA1 RPL7P33-201ENST00000444159 742 ntBASIC4.69□□□□□ -1.66
PRPF39Q86UA1 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.69□□□□□ -1.66
PRPF39Q86UA1 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.69□□□□□ -1.66
PRPF39Q86UA1 SCARNA10-201ENST00000459255 330 ntBASIC4.69□□□□□ -1.66
PRPF39Q86UA1 RN7SL41P-201ENST00000476144 297 ntBASIC4.69□□□□□ -1.66
PRPF39Q86UA1 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.69□□□□□ -1.66
PRPF39Q86UA1 HMGB1P21-201ENST00000502313 581 ntBASIC4.69□□□□□ -1.66
PRPF39Q86UA1 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.69□□□□□ -1.66
PRPF39Q86UA1 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.69□□□□□ -1.66
PRPF39Q86UA1 AC007016.1-201ENST00000512110 244 ntBASIC4.69□□□□□ -1.66
PRPF39Q86UA1 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.69□□□□□ -1.66
PRPF39Q86UA1 AC112198.4-201ENST00000515450 351 ntBASIC4.69□□□□□ -1.66
PRPF39Q86UA1 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.69□□□□□ -1.66
PRPF39Q86UA1 IGJP1-201ENST00000522682 475 ntBASIC4.69□□□□□ -1.66
PRPF39Q86UA1 AC104115.2-201ENST00000523026 687 ntBASIC4.69□□□□□ -1.66
PRPF39Q86UA1 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.69□□□□□ -1.66
PRPF39Q86UA1 PTP4A1P6-201ENST00000531034 478 ntBASIC4.69□□□□□ -1.66
PRPF39Q86UA1 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.69□□□□□ -1.66
PRPF39Q86UA1 AP005119.2-201ENST00000579735 1105 ntBASIC4.69□□□□□ -1.66
PRPF39Q86UA1 AC067852.4-201ENST00000590314 478 ntBASIC4.69□□□□□ -1.66
PRPF39Q86UA1 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.69□□□□□ -1.66
PRPF39Q86UA1 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.69□□□□□ -1.66
PRPF39Q86UA1 AC068620.3-201ENST00000602749 560 ntBASIC4.69□□□□□ -1.66
PRPF39Q86UA1 AL356218.2-201ENST00000605264 187 ntBASIC4.69□□□□□ -1.66
PRPF39Q86UA1 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.69□□□□□ -1.66
PRPF39Q86UA1 MIR6864-201ENST00000617935 70 ntBASIC4.69□□□□□ -1.66
PRPF39Q86UA1 MIR6758-201ENST00000620653 63 ntBASIC4.69□□□□□ -1.66
PRPF39Q86UA1 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
PRPF39Q86UA1 AC139713.2-214ENST00000642059 1811 ntBASIC4.69□□□□□ -1.66
PRPF39Q86UA1 AC108467.2-201ENST00000617640 1597 ntBASIC4.69□□□□□ -1.66
PRPF39Q86UA1 AC017104.4-201ENST00000636283 1592 ntBASIC4.69□□□□□ -1.66
PRPF39Q86UA1 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.69□□□□□ -1.66
PRPF39Q86UA1 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PRPF39Q86UA1 AL391684.1-202ENST00000641293 1636 ntBASIC4.68□□□□□ -1.66
PRPF39Q86UA1 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PRPF39Q86UA1 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.68□□□□□ -1.66
PRPF39Q86UA1 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PRPF39Q86UA1 AC234772.1-201ENST00000377927 937 ntBASIC4.68□□□□□ -1.66
PRPF39Q86UA1 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.68□□□□□ -1.66
PRPF39Q86UA1 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.68□□□□□ -1.66
PRPF39Q86UA1 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.68□□□□□ -1.66
PRPF39Q86UA1 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.68□□□□□ -1.66
PRPF39Q86UA1 AL645931.1-201ENST00000439737 410 ntBASIC4.68□□□□□ -1.66
PRPF39Q86UA1 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.68□□□□□ -1.66
PRPF39Q86UA1 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.68□□□□□ -1.66
PRPF39Q86UA1 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.68□□□□□ -1.66
PRPF39Q86UA1 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PRPF39Q86UA1 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.68□□□□□ -1.66
PRPF39Q86UA1 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.68□□□□□ -1.66
PRPF39Q86UA1 PRELID3BP5-201ENST00000508612 460 ntBASIC4.68□□□□□ -1.66
PRPF39Q86UA1 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.68□□□□□ -1.66
PRPF39Q86UA1 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.68□□□□□ -1.66
PRPF39Q86UA1 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.68□□□□□ -1.66
PRPF39Q86UA1 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.68□□□□□ -1.66
PRPF39Q86UA1 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.68□□□□□ -1.66
PRPF39Q86UA1 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
PRPF39Q86UA1 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
PRPF39Q86UA1 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.68□□□□□ -1.66
PRPF39Q86UA1 AC126365.2-201ENST00000580630 379 ntBASIC4.68□□□□□ -1.66
PRPF39Q86UA1 SLC25A36P1-201ENST00000590111 465 ntBASIC4.68□□□□□ -1.66
PRPF39Q86UA1 AC006116.7-201ENST00000590141 756 ntBASIC4.68□□□□□ -1.66
PRPF39Q86UA1 RPL12P25-202ENST00000598100 674 ntBASIC4.68□□□□□ -1.66
PRPF39Q86UA1 AL133338.2-201ENST00000604292 736 ntBASIC4.68□□□□□ -1.66
PRPF39Q86UA1 BNIP3P31-201ENST00000604515 566 ntBASIC4.68□□□□□ -1.66
PRPF39Q86UA1 AC006338.2-201ENST00000616864 791 ntBASIC4.68□□□□□ -1.66
PRPF39Q86UA1 AC022079.2-201ENST00000619739 566 ntBASIC4.68□□□□□ -1.66
PRPF39Q86UA1 AL138955.1-201ENST00000622881 1040 ntBASIC4.68□□□□□ -1.66
PRPF39Q86UA1 AL049536.1-201ENST00000625043 744 ntBASIC4.68□□□□□ -1.66
PRPF39Q86UA1 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.68□□□□□ -1.66
PRPF39Q86UA1 U3.53-201ENST00000628922 216 ntBASIC4.68□□□□□ -1.66
PRPF39Q86UA1 AC055839.1-201ENST00000634467 498 ntBASIC4.68□□□□□ -1.66
PRPF39Q86UA1 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PRPF39Q86UA1 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.68□□□□□ -1.66
PRPF39Q86UA1 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PRPF39Q86UA1 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.68□□□□□ -1.66
PRPF39Q86UA1 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PRPF39Q86UA1 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.68□□□□□ -1.66
PRPF39Q86UA1 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.67□□□□□ -1.66
PRPF39Q86UA1 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PRPF39Q86UA1 MFSD8-242ENST00000641690 4199 ntBASIC4.67□□□□□ -1.66
PRPF39Q86UA1 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
PRPF39Q86UA1 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.67□□□□□ -1.66
PRPF39Q86UA1 AC021146.4-201ENST00000309229 279 ntBASIC4.67□□□□□ -1.66
PRPF39Q86UA1 AC126755.2-208ENST00000327792 462 ntBASIC4.67□□□□□ -1.66
PRPF39Q86UA1 AC138969.1-213ENST00000331436 462 ntBASIC4.67□□□□□ -1.66
PRPF39Q86UA1 RNU5B-1-201ENST00000363286 116 ntBASIC4.67□□□□□ -1.66
PRPF39Q86UA1 RNA5SP447-201ENST00000363749 119 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms