Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.56□□□□□ -1.52
ATG4DQ86TL0 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.55□□□□□ -1.52
ATG4DQ86TL0 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
ATG4DQ86TL0 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.55□□□□□ -1.52
ATG4DQ86TL0 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ATG4DQ86TL0 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
ATG4DQ86TL0 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.55□□□□□ -1.52
ATG4DQ86TL0 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.55□□□□□ -1.52
ATG4DQ86TL0 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
ATG4DQ86TL0 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
ATG4DQ86TL0 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
ATG4DQ86TL0 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ATG4DQ86TL0 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
ATG4DQ86TL0 AC016583.1-201ENST00000624221 2431 ntBASIC5.55□□□□□ -1.52
ATG4DQ86TL0 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
ATG4DQ86TL0 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
ATG4DQ86TL0 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ATG4DQ86TL0 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
ATG4DQ86TL0 RNU6-223P-201ENST00000362830 107 ntBASIC5.55□□□□□ -1.52
ATG4DQ86TL0 Y_RNA.188-201ENST00000363952 111 ntBASIC5.55□□□□□ -1.52
ATG4DQ86TL0 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.55□□□□□ -1.52
ATG4DQ86TL0 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.55□□□□□ -1.52
ATG4DQ86TL0 RNU1-39P-201ENST00000383897 165 ntBASIC5.55□□□□□ -1.52
ATG4DQ86TL0 RNU4-70P-201ENST00000384579 139 ntBASIC5.55□□□□□ -1.52
ATG4DQ86TL0 RNU6-1222P-201ENST00000384615 107 ntBASIC5.55□□□□□ -1.52
ATG4DQ86TL0 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
ATG4DQ86TL0 SNORA77.2-201ENST00000408571 112 ntBASIC5.55□□□□□ -1.52
ATG4DQ86TL0 RNU2-3P-201ENST00000410144 191 ntBASIC5.55□□□□□ -1.52
ATG4DQ86TL0 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC5.55□□□□□ -1.52
ATG4DQ86TL0 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.55□□□□□ -1.52
ATG4DQ86TL0 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.55□□□□□ -1.52
ATG4DQ86TL0 AC073335.1-201ENST00000427776 363 ntBASIC5.55□□□□□ -1.52
ATG4DQ86TL0 LYPLA1P1-201ENST00000434514 622 ntBASIC5.55□□□□□ -1.52
ATG4DQ86TL0 AC110602.1-201ENST00000437414 318 ntBASIC5.55□□□□□ -1.52
ATG4DQ86TL0 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.55□□□□□ -1.52
ATG4DQ86TL0 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC5.55□□□□□ -1.52
ATG4DQ86TL0 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC5.55□□□□□ -1.52
ATG4DQ86TL0 Z83838.1-202ENST00000456225 839 ntBASIC5.55□□□□□ -1.52
ATG4DQ86TL0 MTCO1P42-201ENST00000457379 726 ntBASIC5.55□□□□□ -1.52
ATG4DQ86TL0 CEACAMP4-201ENST00000457676 421 ntBASIC5.55□□□□□ -1.52
ATG4DQ86TL0 RN7SL352P-201ENST00000466002 277 ntBASIC5.55□□□□□ -1.52
ATG4DQ86TL0 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.55□□□□□ -1.52
ATG4DQ86TL0 AC090638.1-201ENST00000498296 909 ntBASIC5.55□□□□□ -1.52
ATG4DQ86TL0 AC112204.1-201ENST00000502591 103 ntBASIC5.55□□□□□ -1.52
ATG4DQ86TL0 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.55□□□□□ -1.52
ATG4DQ86TL0 AC105417.1-201ENST00000514691 285 ntBASIC5.55□□□□□ -1.52
ATG4DQ86TL0 AC026801.2-201ENST00000515352 425 ntBASIC5.55□□□□□ -1.52
ATG4DQ86TL0 RNU4-49P-201ENST00000516080 140 ntBASIC5.55□□□□□ -1.52
ATG4DQ86TL0 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.55□□□□□ -1.52
ATG4DQ86TL0 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.55□□□□□ -1.52
ATG4DQ86TL0 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.55□□□□□ -1.52
ATG4DQ86TL0 NMNAT1P1-201ENST00000554095 876 ntBASIC5.55□□□□□ -1.52
ATG4DQ86TL0 AL109766.1-201ENST00000555080 552 ntBASIC5.55□□□□□ -1.52
ATG4DQ86TL0 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC5.55□□□□□ -1.52
ATG4DQ86TL0 MIR544B-201ENST00000582372 78 ntBASIC5.55□□□□□ -1.52
ATG4DQ86TL0 AC010525.2-201ENST00000590920 195 ntBASIC5.55□□□□□ -1.52
ATG4DQ86TL0 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.55□□□□□ -1.52
ATG4DQ86TL0 AC113194.1-201ENST00000606037 500 ntBASIC5.55□□□□□ -1.52
ATG4DQ86TL0 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.55□□□□□ -1.52
ATG4DQ86TL0 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC5.55□□□□□ -1.52
ATG4DQ86TL0 AL080312.2-201ENST00000613001 630 ntBASIC5.55□□□□□ -1.52
ATG4DQ86TL0 AC097641.3-201ENST00000613523 464 ntBASIC5.55□□□□□ -1.52
ATG4DQ86TL0 MIR6778-201ENST00000617912 73 ntBASIC5.55□□□□□ -1.52
ATG4DQ86TL0 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.55□□□□□ -1.52
ATG4DQ86TL0 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.55□□□□□ -1.52
ATG4DQ86TL0 MIR1910-201ENST00000636955 80 ntBASIC5.55□□□□□ -1.52
ATG4DQ86TL0 ATM-228ENST00000639240 498 ntTSL 5 BASIC5.55□□□□□ -1.52
ATG4DQ86TL0 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ATG4DQ86TL0 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
ATG4DQ86TL0 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
ATG4DQ86TL0 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
ATG4DQ86TL0 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
ATG4DQ86TL0 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.55□□□□□ -1.52
ATG4DQ86TL0 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
ATG4DQ86TL0 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
ATG4DQ86TL0 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
ATG4DQ86TL0 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.55□□□□□ -1.52
ATG4DQ86TL0 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.55□□□□□ -1.52
ATG4DQ86TL0 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ATG4DQ86TL0 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
ATG4DQ86TL0 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
ATG4DQ86TL0 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.54□□□□□ -1.52
ATG4DQ86TL0 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ATG4DQ86TL0 AC003985.2-201ENST00000562268 1669 ntBASIC5.54□□□□□ -1.52
ATG4DQ86TL0 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
ATG4DQ86TL0 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
ATG4DQ86TL0 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
ATG4DQ86TL0 RNA5SP375-201ENST00000362975 119 ntBASIC5.54□□□□□ -1.52
ATG4DQ86TL0 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.54□□□□□ -1.52
ATG4DQ86TL0 RNU4-31P-201ENST00000384211 141 ntBASIC5.54□□□□□ -1.52
ATG4DQ86TL0 SNORD116-29-201ENST00000384516 83 ntBASIC5.54□□□□□ -1.52
ATG4DQ86TL0 MT-TG-201ENST00000387429 68 ntBASIC5.54□□□□□ -1.52
ATG4DQ86TL0 VN1R8P-201ENST00000407739 893 ntBASIC5.54□□□□□ -1.52
ATG4DQ86TL0 MIR1282-201ENST00000408865 101 ntBASIC5.54□□□□□ -1.52
ATG4DQ86TL0 Y_RNA.618-201ENST00000410949 107 ntBASIC5.54□□□□□ -1.52
ATG4DQ86TL0 AL450992.3-201ENST00000413192 568 ntBASIC5.54□□□□□ -1.52
ATG4DQ86TL0 SNRPFP1-201ENST00000414761 252 ntBASIC5.54□□□□□ -1.52
ATG4DQ86TL0 AC114482.1-201ENST00000418010 247 ntBASIC5.54□□□□□ -1.52
ATG4DQ86TL0 TMBIM7P-201ENST00000418074 855 ntBASIC5.54□□□□□ -1.52
ATG4DQ86TL0 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms