Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 uc_338.9-201ENST00000617424 182 ntBASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
UBE3DQ7Z6J8 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 RNU6-730P-201ENST00000383954 104 ntBASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 U3.23-201ENST00000391132 200 ntBASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 AP000534.2-201ENST00000412729 568 ntBASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 RPL12P9-201ENST00000412942 488 ntBASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 RPS7P8-201ENST00000418311 581 ntBASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 AC234781.4-201ENST00000419384 244 ntBASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 RPL7P12-201ENST00000446719 750 ntBASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 AC233279.1-201ENST00000455300 423 ntBASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 RPL37P3-201ENST00000456825 293 ntBASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 AC007537.2-201ENST00000472093 511 ntBASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 AC104563.1-201ENST00000476147 376 ntBASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 RPSAP51-201ENST00000497462 645 ntBASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 IGKV3D-25-201ENST00000519599 235 ntBASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 AC022616.6-201ENST00000520479 119 ntBASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 HPRT1P3-201ENST00000539521 576 ntBASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 PDCD5P1-201ENST00000543528 309 ntBASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 PSMA3P-201ENST00000555485 635 ntBASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 AC090515.3-201ENST00000560431 315 ntBASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 AL355375.2-201ENST00000574825 175 ntBASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 MIR4502-201ENST00000580432 81 ntBASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 AC243960.4-201ENST00000600532 288 ntBASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 AL360085.1-201ENST00000604713 532 ntBASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 AC009779.8-202ENST00000607990 932 ntBASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 MIR6780B-201ENST00000610307 79 ntBASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 AC073488.3-201ENST00000631611 778 ntBASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 AC010149.2-201ENST00000637608 315 ntBASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 RLIMP2-201ENST00000427891 1563 ntBASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
UBE3DQ7Z6J8 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
UBE3DQ7Z6J8 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
UBE3DQ7Z6J8 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
UBE3DQ7Z6J8 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
UBE3DQ7Z6J8 AC079753.1-201ENST00000623243 3868 ntBASIC5.75□□□□□ -1.49
UBE3DQ7Z6J8 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.75□□□□□ -1.49
UBE3DQ7Z6J8 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
UBE3DQ7Z6J8 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
UBE3DQ7Z6J8 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
UBE3DQ7Z6J8 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
UBE3DQ7Z6J8 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.75□□□□□ -1.49
UBE3DQ7Z6J8 Y_RNA.46-201ENST00000362695 102 ntBASIC5.75□□□□□ -1.49
UBE3DQ7Z6J8 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.75□□□□□ -1.49
UBE3DQ7Z6J8 RNU6-444P-201ENST00000383988 108 ntBASIC5.75□□□□□ -1.49
UBE3DQ7Z6J8 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
UBE3DQ7Z6J8 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.75□□□□□ -1.49
UBE3DQ7Z6J8 RPL35AP24-201ENST00000413846 330 ntBASIC5.75□□□□□ -1.49
UBE3DQ7Z6J8 TPMTP2-201ENST00000414372 726 ntBASIC5.75□□□□□ -1.49
UBE3DQ7Z6J8 AC008280.1-201ENST00000418851 412 ntBASIC5.75□□□□□ -1.49
UBE3DQ7Z6J8 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.75□□□□□ -1.49
UBE3DQ7Z6J8 AL353729.1-201ENST00000425044 720 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 192.2 ms