Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC144BQ3MJ40 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC144BQ3MJ40 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC144BQ3MJ40 AC117529.2-201ENST00000512159 2068 ntBASIC6.1□□□□□ -1.43
CCDC144BQ3MJ40 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC6.1□□□□□ -1.43
CCDC144BQ3MJ40 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC144BQ3MJ40 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC144BQ3MJ40 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC144BQ3MJ40 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
CCDC144BQ3MJ40 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC144BQ3MJ40 SNORA68.2-201ENST00000391263 128 ntBASIC6.1□□□□□ -1.43
CCDC144BQ3MJ40 RNA5SP487-201ENST00000410186 122 ntBASIC6.1□□□□□ -1.43
CCDC144BQ3MJ40 RPL12P9-201ENST00000412942 488 ntBASIC6.1□□□□□ -1.43
CCDC144BQ3MJ40 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC6.1□□□□□ -1.43
CCDC144BQ3MJ40 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC6.1□□□□□ -1.43
CCDC144BQ3MJ40 AC019178.2-201ENST00000423595 505 ntBASIC6.1□□□□□ -1.43
CCDC144BQ3MJ40 AC012519.1-201ENST00000424588 610 ntBASIC6.1□□□□□ -1.43
CCDC144BQ3MJ40 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC6.1□□□□□ -1.43
CCDC144BQ3MJ40 AC098826.1-201ENST00000433943 471 ntBASIC6.1□□□□□ -1.43
CCDC144BQ3MJ40 MTND4P32-201ENST00000437189 1237 ntBASIC6.1□□□□□ -1.43
CCDC144BQ3MJ40 ISCA1P2-201ENST00000438679 421 ntBASIC6.1□□□□□ -1.43
CCDC144BQ3MJ40 AC092427.1-201ENST00000439177 601 ntBASIC6.1□□□□□ -1.43
CCDC144BQ3MJ40 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC144BQ3MJ40 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC6.1□□□□□ -1.43
CCDC144BQ3MJ40 RN7SL188P-201ENST00000469842 285 ntBASIC6.1□□□□□ -1.43
CCDC144BQ3MJ40 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC6.1□□□□□ -1.43
CCDC144BQ3MJ40 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC144BQ3MJ40 RN7SKP82-201ENST00000516786 223 ntBASIC6.1□□□□□ -1.43
CCDC144BQ3MJ40 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC6.1□□□□□ -1.43
CCDC144BQ3MJ40 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC6.1□□□□□ -1.43
CCDC144BQ3MJ40 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC6.1□□□□□ -1.43
CCDC144BQ3MJ40 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC6.1□□□□□ -1.43
CCDC144BQ3MJ40 ZNF705CP-201ENST00000530515 889 ntBASIC6.1□□□□□ -1.43
CCDC144BQ3MJ40 CYCSP28-201ENST00000534284 321 ntBASIC6.1□□□□□ -1.43
CCDC144BQ3MJ40 MTCYBP28-201ENST00000566728 1132 ntBASIC6.1□□□□□ -1.43
CCDC144BQ3MJ40 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC6.1□□□□□ -1.43
CCDC144BQ3MJ40 AC004223.2-201ENST00000590309 544 ntBASIC6.1□□□□□ -1.43
CCDC144BQ3MJ40 AC018714.1-201ENST00000605028 208 ntBASIC6.1□□□□□ -1.43
CCDC144BQ3MJ40 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC6.1□□□□□ -1.43
CCDC144BQ3MJ40 PDCD6IPP1-202ENST00000622242 1064 ntBASIC6.1□□□□□ -1.43
CCDC144BQ3MJ40 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.1□□□□□ -1.43
CCDC144BQ3MJ40 AC127502.3-201ENST00000636170 1206 ntBASIC6.1□□□□□ -1.43
CCDC144BQ3MJ40 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC144BQ3MJ40 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
CCDC144BQ3MJ40 ERCC6-202ENST00000374127 1782 ntBASIC6.1□□□□□ -1.43
CCDC144BQ3MJ40 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC144BQ3MJ40 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC144BQ3MJ40 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
CCDC144BQ3MJ40 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
CCDC144BQ3MJ40 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC144BQ3MJ40 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC144BQ3MJ40 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC144BQ3MJ40 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC144BQ3MJ40 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC144BQ3MJ40 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC144BQ3MJ40 AL031577.2-201ENST00000404133 280 ntBASIC6.09□□□□□ -1.43
CCDC144BQ3MJ40 ZNF603P-201ENST00000405613 487 ntBASIC6.09□□□□□ -1.43
CCDC144BQ3MJ40 AL450338.1-201ENST00000407987 512 ntBASIC6.09□□□□□ -1.43
CCDC144BQ3MJ40 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC144BQ3MJ40 RN7SKP126-201ENST00000411143 300 ntBASIC6.09□□□□□ -1.43
CCDC144BQ3MJ40 MTCYBP38-201ENST00000417160 1123 ntBASIC6.09□□□□□ -1.43
CCDC144BQ3MJ40 TMBIM7P-201ENST00000418074 855 ntBASIC6.09□□□□□ -1.43
CCDC144BQ3MJ40 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC144BQ3MJ40 RPL7AP49-201ENST00000429522 581 ntBASIC6.09□□□□□ -1.43
CCDC144BQ3MJ40 RBMY2QP-201ENST00000429799 1147 ntBASIC6.09□□□□□ -1.43
CCDC144BQ3MJ40 RPL36P19-201ENST00000430744 301 ntBASIC6.09□□□□□ -1.43
CCDC144BQ3MJ40 AL591438.1-201ENST00000433508 581 ntBASIC6.09□□□□□ -1.43
CCDC144BQ3MJ40 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC6.09□□□□□ -1.43
CCDC144BQ3MJ40 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.09□□□□□ -1.43
CCDC144BQ3MJ40 GAPDHP25-201ENST00000447061 1001 ntBASIC6.09□□□□□ -1.43
CCDC144BQ3MJ40 AC009961.3-201ENST00000449832 765 ntBASIC6.09□□□□□ -1.43
CCDC144BQ3MJ40 AC245028.2-201ENST00000458673 253 ntBASIC6.09□□□□□ -1.43
CCDC144BQ3MJ40 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC6.09□□□□□ -1.43
CCDC144BQ3MJ40 AC092045.1-201ENST00000495716 1231 ntBASIC6.09□□□□□ -1.43
CCDC144BQ3MJ40 AC108078.3-201ENST00000502633 489 ntBASIC6.09□□□□□ -1.43
CCDC144BQ3MJ40 RPS4XP20-201ENST00000505751 772 ntBASIC6.09□□□□□ -1.43
CCDC144BQ3MJ40 RNA5SP373-201ENST00000517271 95 ntBASIC6.09□□□□□ -1.43
CCDC144BQ3MJ40 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC144BQ3MJ40 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC6.09□□□□□ -1.43
CCDC144BQ3MJ40 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC144BQ3MJ40 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC6.09□□□□□ -1.43
CCDC144BQ3MJ40 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC6.09□□□□□ -1.43
CCDC144BQ3MJ40 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC144BQ3MJ40 AC005341.1-201ENST00000571086 708 ntBASIC6.09□□□□□ -1.43
CCDC144BQ3MJ40 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC6.09□□□□□ -1.43
CCDC144BQ3MJ40 AC011840.5-201ENST00000582125 771 ntBASIC6.09□□□□□ -1.43
CCDC144BQ3MJ40 PRPF19P1-201ENST00000584766 898 ntBASIC6.09□□□□□ -1.43
CCDC144BQ3MJ40 HSPE1P14-201ENST00000605812 302 ntBASIC6.09□□□□□ -1.43
CCDC144BQ3MJ40 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC6.09□□□□□ -1.43
CCDC144BQ3MJ40 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC6.09□□□□□ -1.43
CCDC144BQ3MJ40 AC091932.2-201ENST00000623014 291 ntBASIC6.09□□□□□ -1.43
CCDC144BQ3MJ40 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.09□□□□□ -1.43
CCDC144BQ3MJ40 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
CCDC144BQ3MJ40 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
CCDC144BQ3MJ40 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.09□□□□□ -1.44
CCDC144BQ3MJ40 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.09□□□□□ -1.44
CCDC144BQ3MJ40 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms