Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC7.03□□□□□ -1.28
CTC1Q2NKJ3 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC7.03□□□□□ -1.28
CTC1Q2NKJ3 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC7.03□□□□□ -1.28
CTC1Q2NKJ3 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
CTC1Q2NKJ3 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CTC1Q2NKJ3 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC7.03□□□□□ -1.28
CTC1Q2NKJ3 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CTC1Q2NKJ3 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC7.03□□□□□ -1.28
CTC1Q2NKJ3 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
CTC1Q2NKJ3 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.28
CTC1Q2NKJ3 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CTC1Q2NKJ3 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7.02□□□□□ -1.29
CTC1Q2NKJ3 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC7.02□□□□□ -1.29
CTC1Q2NKJ3 AC022034.1-201ENST00000512867 2156 ntBASIC7.02□□□□□ -1.29
CTC1Q2NKJ3 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC7.02□□□□□ -1.29
CTC1Q2NKJ3 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CTC1Q2NKJ3 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CTC1Q2NKJ3 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CTC1Q2NKJ3 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
CTC1Q2NKJ3 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CTC1Q2NKJ3 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.02□□□□□ -1.29
CTC1Q2NKJ3 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
CTC1Q2NKJ3 Y_RNA.255-201ENST00000364581 97 ntBASIC7.02□□□□□ -1.29
CTC1Q2NKJ3 RN7SKP81-201ENST00000365603 331 ntBASIC7.02□□□□□ -1.29
CTC1Q2NKJ3 RNU6-1040P-201ENST00000383974 107 ntBASIC7.02□□□□□ -1.29
CTC1Q2NKJ3 RNU6-452P-201ENST00000384406 107 ntBASIC7.02□□□□□ -1.29
CTC1Q2NKJ3 AL390316.1-201ENST00000406279 553 ntBASIC7.02□□□□□ -1.29
CTC1Q2NKJ3 CYCSP17-201ENST00000407870 315 ntBASIC7.02□□□□□ -1.29
CTC1Q2NKJ3 RN7SKP158-201ENST00000410453 326 ntBASIC7.02□□□□□ -1.29
CTC1Q2NKJ3 AC127526.1-201ENST00000417526 366 ntBASIC7.02□□□□□ -1.29
CTC1Q2NKJ3 AC083862.1-201ENST00000427378 1242 ntBASIC7.02□□□□□ -1.29
CTC1Q2NKJ3 AL034399.1-201ENST00000451535 380 ntBASIC7.02□□□□□ -1.29
CTC1Q2NKJ3 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC7.02□□□□□ -1.29
CTC1Q2NKJ3 MEMO1P3-201ENST00000459811 302 ntBASIC7.02□□□□□ -1.29
CTC1Q2NKJ3 FAM206BP-201ENST00000510179 541 ntBASIC7.02□□□□□ -1.29
CTC1Q2NKJ3 TMEM248P1-201ENST00000510579 951 ntBASIC7.02□□□□□ -1.29
CTC1Q2NKJ3 AC067942.3-201ENST00000512025 362 ntBASIC7.02□□□□□ -1.29
CTC1Q2NKJ3 IGHV3-63-201ENST00000518422 341 ntBASIC7.02□□□□□ -1.29
CTC1Q2NKJ3 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC7.02□□□□□ -1.29
CTC1Q2NKJ3 TBCA-209ENST00000522370 435 ntTSL 3 BASIC7.02□□□□□ -1.29
CTC1Q2NKJ3 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC7.02□□□□□ -1.29
CTC1Q2NKJ3 MED21-206ENST00000546323 575 ntTSL 3 BASIC7.02□□□□□ -1.29
CTC1Q2NKJ3 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC7.02□□□□□ -1.29
CTC1Q2NKJ3 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
CTC1Q2NKJ3 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC7.02□□□□□ -1.29
CTC1Q2NKJ3 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CTC1Q2NKJ3 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CTC1Q2NKJ3 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CTC1Q2NKJ3 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CTC1Q2NKJ3 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC7.02□□□□□ -1.29
CTC1Q2NKJ3 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC7.02□□□□□ -1.29
CTC1Q2NKJ3 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC7.02□□□□□ -1.29
CTC1Q2NKJ3 DBF4P1-201ENST00000412976 1892 ntBASIC7.02□□□□□ -1.29
CTC1Q2NKJ3 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CTC1Q2NKJ3 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
CTC1Q2NKJ3 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC7.02□□□□□ -1.29
CTC1Q2NKJ3 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CTC1Q2NKJ3 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 SMG1P5-202ENST00000529428 4219 ntBASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 SMG1P2-201ENST00000566127 4221 ntBASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 AL359195.2-201ENST00000623657 4412 ntBASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 TMSB4XP2-201ENST00000335179 210 ntBASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 RPL32P3-201ENST00000359025 275 ntBASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 RNU6-1066P-201ENST00000363573 105 ntBASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 RNU6-266P-201ENST00000364225 107 ntBASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 RNU6-432P-201ENST00000384196 109 ntBASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 Y_RNA.477-201ENST00000384352 108 ntBASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 MIR16-1-201ENST00000385271 89 ntBASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 SNORD37.1-201ENST00000390968 65 ntBASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 AL031985.1-201ENST00000392713 418 ntBASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 RPL23AP32-201ENST00000395315 459 ntBASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 CBX1P3-201ENST00000413296 527 ntBASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 RPL26P28-201ENST00000451325 435 ntBASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 AC068228.1-201ENST00000461723 211 ntBASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 AC073610.1-201ENST00000489971 396 ntBASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 AC026826.1-201ENST00000493002 361 ntBASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 AC106872.3-201ENST00000495104 446 ntBASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 MTND6P8-201ENST00000503471 522 ntBASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 ODF1-202ENST00000518835 368 ntTSL 3 BASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 AC073581.1-201ENST00000519036 575 ntBASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 AL133399.1-201ENST00000527476 298 ntBASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 TRAV15-201ENST00000556680 249 ntBASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms