Protein–RNA interactions for Protein: Q15651

HMGN3, High mobility group nucleosome-binding domain-containing protein 3, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3Q15651 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.2□□□□□ -1.9
HMGN3Q15651 AC073530.2-201ENST00000623987 261 ntBASIC3.2□□□□□ -1.9
HMGN3Q15651 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.2□□□□□ -1.9
HMGN3Q15651 CDY11P-201ENST00000447168 1651 ntBASIC3.2□□□□□ -1.9
HMGN3Q15651 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HMGN3Q15651 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.19□□□□□ -1.9
HMGN3Q15651 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HMGN3Q15651 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.19□□□□□ -1.9
HMGN3Q15651 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
HMGN3Q15651 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
HMGN3Q15651 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HMGN3Q15651 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HMGN3Q15651 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
HMGN3Q15651 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.19□□□□□ -1.9
HMGN3Q15651 AL356095.1-201ENST00000417217 199 ntBASIC3.19□□□□□ -1.9
HMGN3Q15651 AC114814.2-201ENST00000419195 485 ntBASIC3.19□□□□□ -1.9
HMGN3Q15651 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.19□□□□□ -1.9
HMGN3Q15651 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HMGN3Q15651 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HMGN3Q15651 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.19□□□□□ -1.9
HMGN3Q15651 AC087312.1-201ENST00000471411 480 ntBASIC3.19□□□□□ -1.9
HMGN3Q15651 PCBP2P3-201ENST00000509726 843 ntBASIC3.19□□□□□ -1.9
HMGN3Q15651 TXNP6-201ENST00000510190 310 ntBASIC3.19□□□□□ -1.9
HMGN3Q15651 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.19□□□□□ -1.9
HMGN3Q15651 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.19□□□□□ -1.9
HMGN3Q15651 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.19□□□□□ -1.9
HMGN3Q15651 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HMGN3Q15651 MIR3939-201ENST00000582614 106 ntBASIC3.19□□□□□ -1.9
HMGN3Q15651 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.19□□□□□ -1.9
HMGN3Q15651 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HMGN3Q15651 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.19□□□□□ -1.9
HMGN3Q15651 MIR492-201ENST00000638676 116 ntBASIC3.19□□□□□ -1.9
HMGN3Q15651 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
HMGN3Q15651 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
HMGN3Q15651 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HMGN3Q15651 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.19□□□□□ -1.9
HMGN3Q15651 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
HMGN3Q15651 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
HMGN3Q15651 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
HMGN3Q15651 RAD1P1-201ENST00000231383 813 ntBASIC3.18□□□□□ -1.9
HMGN3Q15651 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
HMGN3Q15651 SNORD6-201ENST00000365444 73 ntBASIC3.18□□□□□ -1.9
HMGN3Q15651 MT-RNR1-201ENST00000389680 954 ntBASIC3.18□□□□□ -1.9
HMGN3Q15651 AL022722.2-201ENST00000402519 180 ntBASIC3.18□□□□□ -1.9
HMGN3Q15651 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.18□□□□□ -1.9
HMGN3Q15651 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.18□□□□□ -1.9
HMGN3Q15651 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.18□□□□□ -1.9
HMGN3Q15651 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.18□□□□□ -1.9
HMGN3Q15651 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HMGN3Q15651 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.18□□□□□ -1.9
HMGN3Q15651 Z74696.2-201ENST00000436514 498 ntBASIC3.18□□□□□ -1.9
HMGN3Q15651 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC3.18□□□□□ -1.9
HMGN3Q15651 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.18□□□□□ -1.9
HMGN3Q15651 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
HMGN3Q15651 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.18□□□□□ -1.9
HMGN3Q15651 RPL23AP62-201ENST00000463396 453 ntBASIC3.18□□□□□ -1.9
HMGN3Q15651 RPS23P7-201ENST00000466210 444 ntBASIC3.18□□□□□ -1.9
HMGN3Q15651 METTL15P1-201ENST00000481421 1045 ntBASIC3.18□□□□□ -1.9
HMGN3Q15651 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.18□□□□□ -1.9
HMGN3Q15651 RAB9BP1-201ENST00000519581 626 ntBASIC3.18□□□□□ -1.9
HMGN3Q15651 AC008011.1-201ENST00000545989 227 ntBASIC3.18□□□□□ -1.9
HMGN3Q15651 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.18□□□□□ -1.9
HMGN3Q15651 AC025884.1-201ENST00000556034 378 ntBASIC3.18□□□□□ -1.9
HMGN3Q15651 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.18□□□□□ -1.9
HMGN3Q15651 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.18□□□□□ -1.9
HMGN3Q15651 AC092653.1-201ENST00000608509 531 ntBASIC3.18□□□□□ -1.9
HMGN3Q15651 AC099778.2-201ENST00000610904 211 ntBASIC3.18□□□□□ -1.9
HMGN3Q15651 AC005962.2-201ENST00000611427 652 ntBASIC3.18□□□□□ -1.9
HMGN3Q15651 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.18□□□□□ -1.9
HMGN3Q15651 AC058791.1-201ENST00000608412 3198 ntBASIC3.18□□□□□ -1.9
HMGN3Q15651 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC3.18□□□□□ -1.9
HMGN3Q15651 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC3.18□□□□□ -1.9
HMGN3Q15651 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.17□□□□□ -1.9
HMGN3Q15651 RLIMP1-201ENST00000339626 1680 ntBASIC3.17□□□□□ -1.9
HMGN3Q15651 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HMGN3Q15651 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.17□□□□□ -1.9
HMGN3Q15651 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.17□□□□□ -1.9
HMGN3Q15651 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
HMGN3Q15651 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
HMGN3Q15651 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
HMGN3Q15651 RNA5SP97-201ENST00000365006 84 ntBASIC3.17□□□□□ -1.9
HMGN3Q15651 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.17□□□□□ -1.9
HMGN3Q15651 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HMGN3Q15651 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
HMGN3Q15651 RPS26P8-201ENST00000393490 348 ntBASIC3.17□□□□□ -1.9
HMGN3Q15651 RPL21P65-201ENST00000406094 466 ntBASIC3.17□□□□□ -1.9
HMGN3Q15651 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.17□□□□□ -1.9
HMGN3Q15651 RPL17P36-201ENST00000420302 549 ntBASIC3.17□□□□□ -1.9
HMGN3Q15651 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.17□□□□□ -1.9
HMGN3Q15651 RPS26P47-201ENST00000427219 348 ntBASIC3.17□□□□□ -1.9
HMGN3Q15651 HIGD1AP12-201ENST00000427832 281 ntBASIC3.17□□□□□ -1.9
HMGN3Q15651 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.17□□□□□ -1.9
HMGN3Q15651 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC3.17□□□□□ -1.9
HMGN3Q15651 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC3.17□□□□□ -1.9
HMGN3Q15651 AL162151.2-201ENST00000448875 158 ntBASIC3.17□□□□□ -1.9
HMGN3Q15651 TPT1P13-201ENST00000449760 499 ntBASIC3.17□□□□□ -1.9
HMGN3Q15651 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.17□□□□□ -1.9
HMGN3Q15651 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.17□□□□□ -1.9
HMGN3Q15651 RPS3AP6-201ENST00000484430 795 ntBASIC3.17□□□□□ -1.9
HMGN3Q15651 AL035404.1-201ENST00000497982 568 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms