Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC3.95□□□□□ -1.78
CX3CL1P78423 IGHVIII-2-1-201ENST00000518843 291 ntBASIC3.95□□□□□ -1.78
CX3CL1P78423 NPM1P6-201ENST00000521088 871 ntBASIC3.95□□□□□ -1.78
CX3CL1P78423 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.95□□□□□ -1.78
CX3CL1P78423 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.95□□□□□ -1.78
CX3CL1P78423 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CX3CL1P78423 HMGN2P6-201ENST00000551091 273 ntBASIC3.95□□□□□ -1.78
CX3CL1P78423 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.95□□□□□ -1.78
CX3CL1P78423 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.95□□□□□ -1.78
CX3CL1P78423 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.95□□□□□ -1.78
CX3CL1P78423 GTF2IP8-201ENST00000560687 584 ntBASIC3.95□□□□□ -1.78
CX3CL1P78423 AGGF1P6-201ENST00000569213 976 ntBASIC3.95□□□□□ -1.78
CX3CL1P78423 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC3.95□□□□□ -1.78
CX3CL1P78423 MIR4512-201ENST00000583257 77 ntBASIC3.95□□□□□ -1.78
CX3CL1P78423 MIR4691-201ENST00000583764 85 ntBASIC3.95□□□□□ -1.78
CX3CL1P78423 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC3.95□□□□□ -1.78
CX3CL1P78423 AC011477.5-201ENST00000586571 259 ntBASIC3.95□□□□□ -1.78
CX3CL1P78423 AL359535.1-201ENST00000612100 1087 ntBASIC3.95□□□□□ -1.78
CX3CL1P78423 AL049794.2-201ENST00000616301 365 ntBASIC3.95□□□□□ -1.78
CX3CL1P78423 MIR6864-201ENST00000617935 70 ntBASIC3.95□□□□□ -1.78
CX3CL1P78423 AP002799.1-201ENST00000623552 423 ntBASIC3.95□□□□□ -1.78
CX3CL1P78423 MAPK10-286ENST00000641208 8747 ntBASIC3.95□□□□□ -1.78
CX3CL1P78423 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
CX3CL1P78423 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CX3CL1P78423 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC3.95□□□□□ -1.78
CX3CL1P78423 ASNSP1-201ENST00000518311 1939 ntBASIC3.95□□□□□ -1.78
CX3CL1P78423 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
CX3CL1P78423 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CX3CL1P78423 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.95□□□□□ -1.78
CX3CL1P78423 AC109780.1-201ENST00000451768 1344 ntBASIC3.95□□□□□ -1.78
CX3CL1P78423 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
CX3CL1P78423 SALL4P2-201ENST00000423288 2910 ntBASIC3.94□□□□□ -1.78
CX3CL1P78423 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC3.94□□□□□ -1.78
CX3CL1P78423 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CX3CL1P78423 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
CX3CL1P78423 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC3.94□□□□□ -1.78
CX3CL1P78423 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.94□□□□□ -1.78
CX3CL1P78423 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
CX3CL1P78423 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CX3CL1P78423 AC139713.2-215ENST00000641428 5037 ntBASIC3.94□□□□□ -1.78
CX3CL1P78423 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
CX3CL1P78423 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC3.94□□□□□ -1.78
CX3CL1P78423 RNU6-1066P-201ENST00000363573 105 ntBASIC3.94□□□□□ -1.78
CX3CL1P78423 RNU6-560P-201ENST00000364007 108 ntBASIC3.94□□□□□ -1.78
CX3CL1P78423 RNU4-4P-201ENST00000364588 130 ntBASIC3.94□□□□□ -1.78
CX3CL1P78423 RNA5SP428-201ENST00000365129 132 ntBASIC3.94□□□□□ -1.78
CX3CL1P78423 SUGT1P1-201ENST00000379514 476 ntBASIC3.94□□□□□ -1.78
CX3CL1P78423 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC3.94□□□□□ -1.78
CX3CL1P78423 MTND4P13-201ENST00000402078 1023 ntBASIC3.94□□□□□ -1.78
CX3CL1P78423 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CX3CL1P78423 RNA5SP80-201ENST00000410475 111 ntBASIC3.94□□□□□ -1.78
CX3CL1P78423 RPL23AP27-201ENST00000415161 451 ntBASIC3.94□□□□□ -1.78
CX3CL1P78423 AL008987.1-201ENST00000415528 237 ntBASIC3.94□□□□□ -1.78
CX3CL1P78423 BMS1P13-201ENST00000417301 885 ntBASIC3.94□□□□□ -1.78
CX3CL1P78423 TMBIM7P-201ENST00000418074 855 ntBASIC3.94□□□□□ -1.78
CX3CL1P78423 AF186996.5-201ENST00000418098 904 ntBASIC3.94□□□□□ -1.78
CX3CL1P78423 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC3.94□□□□□ -1.78
CX3CL1P78423 QRSL1P2-201ENST00000418582 964 ntBASIC3.94□□□□□ -1.78
CX3CL1P78423 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC3.94□□□□□ -1.78
CX3CL1P78423 RPL36P19-201ENST00000430744 301 ntBASIC3.94□□□□□ -1.78
CX3CL1P78423 USP9YP31-201ENST00000431405 881 ntBASIC3.94□□□□□ -1.78
CX3CL1P78423 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.94□□□□□ -1.78
CX3CL1P78423 RHOT1P3-201ENST00000436571 331 ntBASIC3.94□□□□□ -1.78
CX3CL1P78423 MTND6P18-201ENST00000439477 513 ntBASIC3.94□□□□□ -1.78
CX3CL1P78423 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.94□□□□□ -1.78
CX3CL1P78423 CEACAMP7-201ENST00000444105 496 ntBASIC3.94□□□□□ -1.78
CX3CL1P78423 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.94□□□□□ -1.78
CX3CL1P78423 MYO5BP2-201ENST00000449815 1277 ntBASIC3.94□□□□□ -1.78
CX3CL1P78423 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC3.94□□□□□ -1.78
CX3CL1P78423 AL356981.1-201ENST00000454879 684 ntBASIC3.94□□□□□ -1.78
CX3CL1P78423 NECAP1P2-201ENST00000455668 727 ntBASIC3.94□□□□□ -1.78
CX3CL1P78423 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.94□□□□□ -1.78
CX3CL1P78423 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.94□□□□□ -1.78
CX3CL1P78423 AC068587.2-201ENST00000478386 781 ntBASIC3.94□□□□□ -1.78
CX3CL1P78423 BOLA3P3-201ENST00000505182 232 ntBASIC3.94□□□□□ -1.78
CX3CL1P78423 AC034244.1-201ENST00000507687 207 ntBASIC3.94□□□□□ -1.78
CX3CL1P78423 AC090071.1-201ENST00000507713 644 ntBASIC3.94□□□□□ -1.78
CX3CL1P78423 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC3.94□□□□□ -1.78
CX3CL1P78423 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC3.94□□□□□ -1.78
CX3CL1P78423 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.94□□□□□ -1.78
CX3CL1P78423 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CX3CL1P78423 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.94□□□□□ -1.78
CX3CL1P78423 APPL2-203ENST00000546731 684 ntTSL 2 BASIC3.94□□□□□ -1.78
CX3CL1P78423 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC3.94□□□□□ -1.78
CX3CL1P78423 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC3.94□□□□□ -1.78
CX3CL1P78423 AC068446.3-201ENST00000555285 382 ntBASIC3.94□□□□□ -1.78
CX3CL1P78423 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CX3CL1P78423 AC090888.2-201ENST00000559765 1144 ntBASIC3.94□□□□□ -1.78
CX3CL1P78423 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.94□□□□□ -1.78
CX3CL1P78423 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.94□□□□□ -1.78
CX3CL1P78423 AC093519.1-201ENST00000566109 298 ntBASIC3.94□□□□□ -1.78
CX3CL1P78423 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.94□□□□□ -1.78
CX3CL1P78423 TVP23CP2-201ENST00000571473 623 ntBASIC3.94□□□□□ -1.78
CX3CL1P78423 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.94□□□□□ -1.78
CX3CL1P78423 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.94□□□□□ -1.78
CX3CL1P78423 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC3.94□□□□□ -1.78
CX3CL1P78423 OR7E18P-201ENST00000592589 702 ntBASIC3.94□□□□□ -1.78
CX3CL1P78423 VN1R78P-201ENST00000597393 564 ntBASIC3.94□□□□□ -1.78
CX3CL1P78423 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.94□□□□□ -1.78
CX3CL1P78423 MRPS35P3-201ENST00000603189 709 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms