Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 MFSD8-220ENST00000641243 1422 ntBASIC4.28□□□□□ -1.72
TPM4P67936 AC090229.1-201ENST00000590983 1609 ntBASIC4.28□□□□□ -1.72
TPM4P67936 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
TPM4P67936 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TPM4P67936 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TPM4P67936 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
TPM4P67936 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
TPM4P67936 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
TPM4P67936 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
TPM4P67936 AC106871.1-201ENST00000568324 3102 ntBASIC4.27□□□□□ -1.73
TPM4P67936 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.27□□□□□ -1.73
TPM4P67936 AL139811.1-201ENST00000424779 2299 ntBASIC4.27□□□□□ -1.73
TPM4P67936 AC100871.1-201ENST00000507871 1456 ntBASIC4.27□□□□□ -1.73
TPM4P67936 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TPM4P67936 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
TPM4P67936 RNA5SP509-201ENST00000364577 119 ntBASIC4.27□□□□□ -1.73
TPM4P67936 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.27□□□□□ -1.73
TPM4P67936 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TPM4P67936 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TPM4P67936 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TPM4P67936 AC009237.5-201ENST00000414271 501 ntBASIC4.27□□□□□ -1.73
TPM4P67936 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.27□□□□□ -1.73
TPM4P67936 AC093716.1-201ENST00000435923 377 ntBASIC4.27□□□□□ -1.73
TPM4P67936 AL138878.2-201ENST00000440581 1241 ntBASIC4.27□□□□□ -1.73
TPM4P67936 RAB28P3-201ENST00000448325 597 ntBASIC4.27□□□□□ -1.73
TPM4P67936 RPL7P48-201ENST00000461513 746 ntBASIC4.27□□□□□ -1.73
TPM4P67936 AC011276.1-201ENST00000469688 323 ntBASIC4.27□□□□□ -1.73
TPM4P67936 UQCRHP4-201ENST00000471686 272 ntBASIC4.27□□□□□ -1.73
TPM4P67936 AC007537.2-201ENST00000472093 511 ntBASIC4.27□□□□□ -1.73
TPM4P67936 AC011037.1-201ENST00000483964 558 ntBASIC4.27□□□□□ -1.73
TPM4P67936 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.27□□□□□ -1.73
TPM4P67936 AC005912.1-201ENST00000495392 255 ntBASIC4.27□□□□□ -1.73
TPM4P67936 AC093840.1-201ENST00000511599 336 ntBASIC4.27□□□□□ -1.73
TPM4P67936 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.27□□□□□ -1.73
TPM4P67936 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.27□□□□□ -1.73
TPM4P67936 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.27□□□□□ -1.73
TPM4P67936 NPM1P47-201ENST00000560843 856 ntBASIC4.27□□□□□ -1.73
TPM4P67936 AC006116.5-201ENST00000591936 559 ntBASIC4.27□□□□□ -1.73
TPM4P67936 AC022146.1-201ENST00000595307 847 ntBASIC4.27□□□□□ -1.73
TPM4P67936 AL096803.3-201ENST00000609032 532 ntBASIC4.27□□□□□ -1.73
TPM4P67936 AP000894.4-201ENST00000610185 483 ntBASIC4.27□□□□□ -1.73
TPM4P67936 MIR6719-201ENST00000622428 87 ntBASIC4.27□□□□□ -1.73
TPM4P67936 AC145207.9-201ENST00000623802 325 ntBASIC4.27□□□□□ -1.73
TPM4P67936 MIR3653-201ENST00000625572 110 ntBASIC4.27□□□□□ -1.73
TPM4P67936 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.27□□□□□ -1.73
TPM4P67936 AL136964.1-201ENST00000622038 2990 ntBASIC4.27□□□□□ -1.73
TPM4P67936 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TPM4P67936 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
TPM4P67936 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.26□□□□□ -1.73
TPM4P67936 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TPM4P67936 SNORA62.2-201ENST00000364672 152 ntBASIC4.26□□□□□ -1.73
TPM4P67936 RNVU1-6-201ENST00000364688 164 ntBASIC4.26□□□□□ -1.73
TPM4P67936 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.26□□□□□ -1.73
TPM4P67936 MIR199A2-201ENST00000385289 110 ntBASIC4.26□□□□□ -1.73
TPM4P67936 ENSAP1-201ENST00000392855 326 ntBASIC4.26□□□□□ -1.73
TPM4P67936 AL133270.1-201ENST00000402635 279 ntBASIC4.26□□□□□ -1.73
TPM4P67936 AL391417.1-201ENST00000404100 426 ntBASIC4.26□□□□□ -1.73
TPM4P67936 RN7SKP285-201ENST00000410137 318 ntBASIC4.26□□□□□ -1.73
TPM4P67936 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.26□□□□□ -1.73
TPM4P67936 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.26□□□□□ -1.73
TPM4P67936 AC114814.2-201ENST00000419195 485 ntBASIC4.26□□□□□ -1.73
TPM4P67936 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.26□□□□□ -1.73
TPM4P67936 DNAJC19P7-201ENST00000428811 344 ntBASIC4.26□□□□□ -1.73
TPM4P67936 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.26□□□□□ -1.73
TPM4P67936 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.26□□□□□ -1.73
TPM4P67936 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.26□□□□□ -1.73
TPM4P67936 AL136097.1-201ENST00000456945 913 ntBASIC4.26□□□□□ -1.73
TPM4P67936 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.26□□□□□ -1.73
TPM4P67936 AC108941.1-201ENST00000502853 530 ntBASIC4.26□□□□□ -1.73
TPM4P67936 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.26□□□□□ -1.73
TPM4P67936 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.26□□□□□ -1.73
TPM4P67936 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.26□□□□□ -1.73
TPM4P67936 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.26□□□□□ -1.73
TPM4P67936 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.26□□□□□ -1.73
TPM4P67936 VN1R79P-201ENST00000593540 513 ntBASIC4.26□□□□□ -1.73
TPM4P67936 AC013244.1-201ENST00000604279 193 ntBASIC4.26□□□□□ -1.73
TPM4P67936 AC007423.1-201ENST00000605009 627 ntBASIC4.26□□□□□ -1.73
TPM4P67936 AC100827.5-201ENST00000615883 426 ntBASIC4.26□□□□□ -1.73
TPM4P67936 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.26□□□□□ -1.73
TPM4P67936 AP000843.1-201ENST00000624880 701 ntBASIC4.26□□□□□ -1.73
TPM4P67936 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.26□□□□□ -1.73
TPM4P67936 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TPM4P67936 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.26□□□□□ -1.73
TPM4P67936 SPATA2P1-201ENST00000431223 2055 ntBASIC4.26□□□□□ -1.73
TPM4P67936 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TPM4P67936 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TPM4P67936 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
TPM4P67936 AC005261.4-201ENST00000600047 1385 ntBASIC4.26□□□□□ -1.73
TPM4P67936 RIOK3P1-201ENST00000418778 1528 ntBASIC4.26□□□□□ -1.73
TPM4P67936 AC017002.4-201ENST00000604721 1525 ntBASIC4.26□□□□□ -1.73
TPM4P67936 ASNSP1-204ENST00000641977 1664 ntBASIC4.26□□□□□ -1.73
TPM4P67936 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
TPM4P67936 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.25□□□□□ -1.73
TPM4P67936 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TPM4P67936 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.25□□□□□ -1.73
TPM4P67936 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
TPM4P67936 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TPM4P67936 RNA5SP97-201ENST00000365006 84 ntBASIC4.25□□□□□ -1.73
TPM4P67936 MIR184-201ENST00000384962 84 ntBASIC4.25□□□□□ -1.73
TPM4P67936 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms