Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RHBDL3P58872 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.56□□□□□ -1.52
RHBDL3P58872 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.55□□□□□ -1.52
RHBDL3P58872 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RHBDL3P58872 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RHBDL3P58872 DCAF13P3-201ENST00000561147 1334 ntBASIC5.55□□□□□ -1.52
RHBDL3P58872 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RHBDL3P58872 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RHBDL3P58872 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
RHBDL3P58872 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
RHBDL3P58872 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
RHBDL3P58872 AC008549.2-201ENST00000333482 706 ntBASIC5.55□□□□□ -1.52
RHBDL3P58872 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
RHBDL3P58872 AL121978.1-201ENST00000402778 359 ntBASIC5.55□□□□□ -1.52
RHBDL3P58872 RPS15AP40-201ENST00000419621 391 ntBASIC5.55□□□□□ -1.52
RHBDL3P58872 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC5.55□□□□□ -1.52
RHBDL3P58872 AC010881.1-201ENST00000433830 235 ntBASIC5.55□□□□□ -1.52
RHBDL3P58872 AC073143.1-201ENST00000436316 395 ntBASIC5.55□□□□□ -1.52
RHBDL3P58872 RAB11AP1-201ENST00000442978 646 ntBASIC5.55□□□□□ -1.52
RHBDL3P58872 MRPL42P4-201ENST00000453267 443 ntBASIC5.55□□□□□ -1.52
RHBDL3P58872 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC5.55□□□□□ -1.52
RHBDL3P58872 SCARNA10-201ENST00000459255 330 ntBASIC5.55□□□□□ -1.52
RHBDL3P58872 AC090142.1-201ENST00000465776 462 ntBASIC5.55□□□□□ -1.52
RHBDL3P58872 FTH1P2-201ENST00000466086 412 ntBASIC5.55□□□□□ -1.52
RHBDL3P58872 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
RHBDL3P58872 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RHBDL3P58872 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RHBDL3P58872 LSM3P2-201ENST00000551246 273 ntBASIC5.55□□□□□ -1.52
RHBDL3P58872 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC5.55□□□□□ -1.52
RHBDL3P58872 MIR4509-3-201ENST00000578671 94 ntBASIC5.55□□□□□ -1.52
RHBDL3P58872 MIR4509-2-201ENST00000583920 94 ntBASIC5.55□□□□□ -1.52
RHBDL3P58872 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.55□□□□□ -1.52
RHBDL3P58872 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RHBDL3P58872 MIR4509-1-201ENST00000618224 94 ntBASIC5.55□□□□□ -1.52
RHBDL3P58872 AK6-205ENST00000618980 483 ntTSL 2 BASIC5.55□□□□□ -1.52
RHBDL3P58872 AL596275.2-204ENST00000641628 552 ntBASIC5.55□□□□□ -1.52
RHBDL3P58872 AL596275.2-206ENST00000641957 626 ntBASIC5.55□□□□□ -1.52
RHBDL3P58872 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RHBDL3P58872 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.55□□□□□ -1.52
RHBDL3P58872 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RHBDL3P58872 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
RHBDL3P58872 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RHBDL3P58872 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
RHBDL3P58872 DDX18P5-201ENST00000534547 1306 ntBASIC5.54□□□□□ -1.52
RHBDL3P58872 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
RHBDL3P58872 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.54□□□□□ -1.52
RHBDL3P58872 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
RHBDL3P58872 SNORA70.2-201ENST00000364506 135 ntBASIC5.54□□□□□ -1.52
RHBDL3P58872 RNU6-575P-201ENST00000411326 105 ntBASIC5.54□□□□□ -1.52
RHBDL3P58872 E2F6P2-201ENST00000420708 748 ntBASIC5.54□□□□□ -1.52
RHBDL3P58872 OFD1P2Y-201ENST00000421895 1149 ntBASIC5.54□□□□□ -1.52
RHBDL3P58872 AC104333.2-201ENST00000422630 192 ntBASIC5.54□□□□□ -1.52
RHBDL3P58872 RPL7AP25-201ENST00000423357 805 ntBASIC5.54□□□□□ -1.52
RHBDL3P58872 OSTCP5-201ENST00000425293 453 ntBASIC5.54□□□□□ -1.52
RHBDL3P58872 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC5.54□□□□□ -1.52
RHBDL3P58872 RSL24D1P6-201ENST00000426934 401 ntBASIC5.54□□□□□ -1.52
RHBDL3P58872 MTCYBP32-201ENST00000427945 1084 ntBASIC5.54□□□□□ -1.52
RHBDL3P58872 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.54□□□□□ -1.52
RHBDL3P58872 ELOCP6-201ENST00000429066 328 ntBASIC5.54□□□□□ -1.52
RHBDL3P58872 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.54□□□□□ -1.52
RHBDL3P58872 HMGB3P6-201ENST00000444896 598 ntBASIC5.54□□□□□ -1.52
RHBDL3P58872 RPL7P59-201ENST00000447700 943 ntBASIC5.54□□□□□ -1.52
RHBDL3P58872 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.54□□□□□ -1.52
RHBDL3P58872 ELOCP12-201ENST00000458706 328 ntBASIC5.54□□□□□ -1.52
RHBDL3P58872 AC104164.3-201ENST00000467363 1258 ntBASIC5.54□□□□□ -1.52
RHBDL3P58872 AC025164.1-201ENST00000496249 478 ntBASIC5.54□□□□□ -1.52
RHBDL3P58872 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.54□□□□□ -1.52
RHBDL3P58872 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.54□□□□□ -1.52
RHBDL3P58872 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.54□□□□□ -1.52
RHBDL3P58872 DYNLL1P4-201ENST00000549314 266 ntBASIC5.54□□□□□ -1.52
RHBDL3P58872 CENPUP2-201ENST00000555897 1186 ntBASIC5.54□□□□□ -1.52
RHBDL3P58872 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.54□□□□□ -1.52
RHBDL3P58872 EIF5A2P1-201ENST00000564027 460 ntBASIC5.54□□□□□ -1.52
RHBDL3P58872 MTCYBP28-201ENST00000566728 1132 ntBASIC5.54□□□□□ -1.52
RHBDL3P58872 AC074051.3-201ENST00000570238 358 ntBASIC5.54□□□□□ -1.52
RHBDL3P58872 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.54□□□□□ -1.52
RHBDL3P58872 MIR4504-201ENST00000577413 92 ntBASIC5.54□□□□□ -1.52
RHBDL3P58872 AC127024.5-201ENST00000580085 462 ntBASIC5.54□□□□□ -1.52
RHBDL3P58872 HMGB2P1-201ENST00000591146 634 ntBASIC5.54□□□□□ -1.52
RHBDL3P58872 AL020997.3-201ENST00000602843 359 ntBASIC5.54□□□□□ -1.52
RHBDL3P58872 AP003973.1-201ENST00000604639 691 ntBASIC5.54□□□□□ -1.52
RHBDL3P58872 AL590392.1-201ENST00000604960 446 ntBASIC5.54□□□□□ -1.52
RHBDL3P58872 AP005137.2-201ENST00000609238 400 ntBASIC5.54□□□□□ -1.52
RHBDL3P58872 AC012409.3-201ENST00000611343 981 ntBASIC5.54□□□□□ -1.52
RHBDL3P58872 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
RHBDL3P58872 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.54□□□□□ -1.52
RHBDL3P58872 AC010608.3-201ENST00000625048 527 ntBASIC5.54□□□□□ -1.52
RHBDL3P58872 MIR4496-201ENST00000635896 61 ntBASIC5.54□□□□□ -1.52
RHBDL3P58872 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
RHBDL3P58872 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RHBDL3P58872 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
RHBDL3P58872 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.54□□□□□ -1.52
RHBDL3P58872 AC011755.1-201ENST00000623763 2049 ntBASIC5.53□□□□□ -1.52
RHBDL3P58872 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
RHBDL3P58872 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RHBDL3P58872 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.53□□□□□ -1.52
RHBDL3P58872 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RHBDL3P58872 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RHBDL3P58872 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.53□□□□□ -1.52
RHBDL3P58872 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms