Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.42□□□□□ -1.86
CLDN12P56749 AC022616.2-201ENST00000523185 300 ntBASIC3.42□□□□□ -1.86
CLDN12P56749 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.42□□□□□ -1.86
CLDN12P56749 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.42□□□□□ -1.86
CLDN12P56749 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.42□□□□□ -1.86
CLDN12P56749 AC068831.4-201ENST00000556118 109 ntBASIC3.42□□□□□ -1.86
CLDN12P56749 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.42□□□□□ -1.86
CLDN12P56749 MIR4480-201ENST00000582492 71 ntBASIC3.42□□□□□ -1.86
CLDN12P56749 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.42□□□□□ -1.86
CLDN12P56749 Z82195.1-201ENST00000604558 398 ntBASIC3.42□□□□□ -1.86
CLDN12P56749 AC211433.2-201ENST00000608433 387 ntBASIC3.42□□□□□ -1.86
CLDN12P56749 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.42□□□□□ -1.86
CLDN12P56749 AC091905.1-201ENST00000624400 311 ntBASIC3.42□□□□□ -1.86
CLDN12P56749 WDR75-207ENST00000631047 270 ntTSL 5 BASIC3.42□□□□□ -1.86
CLDN12P56749 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLDN12P56749 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.42□□□□□ -1.86
CLDN12P56749 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.42□□□□□ -1.86
CLDN12P56749 CR381670.1-201ENST00000624291 1693 ntBASIC3.42□□□□□ -1.86
CLDN12P56749 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.42□□□□□ -1.86
CLDN12P56749 MAPK10-373ENST00000641983 6772 ntBASIC3.42□□□□□ -1.86
CLDN12P56749 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CLDN12P56749 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLDN12P56749 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CLDN12P56749 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.41□□□□□ -1.86
CLDN12P56749 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLDN12P56749 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLDN12P56749 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.41□□□□□ -1.86
CLDN12P56749 RPL7AP73-201ENST00000413490 353 ntBASIC3.41□□□□□ -1.86
CLDN12P56749 PRELID3BP11-201ENST00000414230 479 ntBASIC3.41□□□□□ -1.86
CLDN12P56749 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.41□□□□□ -1.86
CLDN12P56749 FAR2P4-202ENST00000425399 584 ntBASIC3.41□□□□□ -1.86
CLDN12P56749 AL732292.1-201ENST00000426692 226 ntBASIC3.41□□□□□ -1.86
CLDN12P56749 USP9YP9-201ENST00000429406 715 ntBASIC3.41□□□□□ -1.86
CLDN12P56749 MTCO1P52-201ENST00000433928 531 ntBASIC3.41□□□□□ -1.86
CLDN12P56749 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.41□□□□□ -1.86
CLDN12P56749 USP9YP7-201ENST00000436723 430 ntBASIC3.41□□□□□ -1.86
CLDN12P56749 ARL5AP3-201ENST00000439327 386 ntBASIC3.41□□□□□ -1.86
CLDN12P56749 AC009263.1-201ENST00000441193 1239 ntBASIC3.41□□□□□ -1.86
CLDN12P56749 USP9YP32-201ENST00000452432 430 ntBASIC3.41□□□□□ -1.86
CLDN12P56749 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.41□□□□□ -1.86
CLDN12P56749 RPL23AP24-201ENST00000458203 385 ntBASIC3.41□□□□□ -1.86
CLDN12P56749 RPS20P4-201ENST00000461659 355 ntBASIC3.41□□□□□ -1.86
CLDN12P56749 AC092691.2-201ENST00000461787 803 ntBASIC3.41□□□□□ -1.86
CLDN12P56749 AP000926.3-201ENST00000497201 299 ntBASIC3.41□□□□□ -1.86
CLDN12P56749 NDUFA5P12-201ENST00000503796 343 ntBASIC3.41□□□□□ -1.86
CLDN12P56749 CDH12P2-201ENST00000504393 298 ntBASIC3.41□□□□□ -1.86
CLDN12P56749 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLDN12P56749 OR4U1P-201ENST00000554958 912 ntBASIC3.41□□□□□ -1.86
CLDN12P56749 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.41□□□□□ -1.86
CLDN12P56749 AL133457.1-201ENST00000564251 987 ntBASIC3.41□□□□□ -1.86
CLDN12P56749 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.41□□□□□ -1.86
CLDN12P56749 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.41□□□□□ -1.86
CLDN12P56749 RNA5SP108-201ENST00000605921 117 ntBASIC3.41□□□□□ -1.86
CLDN12P56749 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.41□□□□□ -1.86
CLDN12P56749 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.41□□□□□ -1.86
CLDN12P56749 AC105429.2-201ENST00000610567 517 ntBASIC3.41□□□□□ -1.86
CLDN12P56749 MIR7973-1-201ENST00000614683 76 ntBASIC3.41□□□□□ -1.86
CLDN12P56749 MIR7151-201ENST00000617477 60 ntBASIC3.41□□□□□ -1.86
CLDN12P56749 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CLDN12P56749 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CLDN12P56749 AC019080.5-201ENST00000624891 757 ntBASIC3.41□□□□□ -1.86
CLDN12P56749 CR392039.4-201ENST00000624968 501 ntBASIC3.41□□□□□ -1.86
CLDN12P56749 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.41□□□□□ -1.86
CLDN12P56749 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.41□□□□□ -1.86
CLDN12P56749 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.41□□□□□ -1.86
CLDN12P56749 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CLDN12P56749 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CLDN12P56749 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
CLDN12P56749 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
CLDN12P56749 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CLDN12P56749 CCNB2P1-201ENST00000399411 1150 ntBASIC3.4□□□□□ -1.87
CLDN12P56749 HMGB3P19-201ENST00000403971 560 ntBASIC3.4□□□□□ -1.87
CLDN12P56749 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.4□□□□□ -1.87
CLDN12P56749 OR5BE1P-201ENST00000425977 939 ntBASIC3.4□□□□□ -1.87
CLDN12P56749 ELOCP6-201ENST00000429066 328 ntBASIC3.4□□□□□ -1.87
CLDN12P56749 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.4□□□□□ -1.87
CLDN12P56749 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC3.4□□□□□ -1.87
CLDN12P56749 RANP8-201ENST00000444720 713 ntBASIC3.4□□□□□ -1.87
CLDN12P56749 ELOCP12-201ENST00000458706 328 ntBASIC3.4□□□□□ -1.87
CLDN12P56749 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CLDN12P56749 TRBV12-2-201ENST00000489763 344 ntBASIC3.4□□□□□ -1.87
CLDN12P56749 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.4□□□□□ -1.87
CLDN12P56749 AC093720.1-201ENST00000505681 714 ntBASIC3.4□□□□□ -1.87
CLDN12P56749 NDUFB4P9-201ENST00000511646 388 ntBASIC3.4□□□□□ -1.87
CLDN12P56749 AC099522.1-202ENST00000514718 367 ntBASIC3.4□□□□□ -1.87
CLDN12P56749 SNORA70.14-201ENST00000516205 110 ntBASIC3.4□□□□□ -1.87
CLDN12P56749 RN7SKP92-201ENST00000517266 244 ntBASIC3.4□□□□□ -1.87
CLDN12P56749 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.4□□□□□ -1.87
CLDN12P56749 OR4C2P-201ENST00000530855 1064 ntBASIC3.4□□□□□ -1.87
CLDN12P56749 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.4□□□□□ -1.87
CLDN12P56749 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.4□□□□□ -1.87
CLDN12P56749 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.87
CLDN12P56749 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.4□□□□□ -1.87
CLDN12P56749 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.4□□□□□ -1.87
CLDN12P56749 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.4□□□□□ -1.87
CLDN12P56749 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.4□□□□□ -1.87
CLDN12P56749 AC020915.5-201ENST00000596836 964 ntBASIC3.4□□□□□ -1.87
CLDN12P56749 AP004372.1-201ENST00000604842 844 ntBASIC3.4□□□□□ -1.87
CLDN12P56749 AP003117.2-201ENST00000606010 545 ntBASIC3.4□□□□□ -1.87
CLDN12P56749 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 163.1 ms