Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 VPS8-228ENST00000628962 207 ntTSL 5 BASIC5.74□□□□□ -1.49
EPHB3P54753 AC079776.5-201ENST00000641920 211 ntBASIC5.74□□□□□ -1.49
EPHB3P54753 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
EPHB3P54753 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
EPHB3P54753 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.74□□□□□ -1.49
EPHB3P54753 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
EPHB3P54753 CDC27P2-201ENST00000425026 1922 ntBASIC5.74□□□□□ -1.49
EPHB3P54753 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
EPHB3P54753 AC135352.1-201ENST00000506173 1418 ntBASIC5.74□□□□□ -1.49
EPHB3P54753 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
EPHB3P54753 AC068870.1-201ENST00000563737 2455 ntBASIC5.73□□□□□ -1.49
EPHB3P54753 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
EPHB3P54753 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
EPHB3P54753 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
EPHB3P54753 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
EPHB3P54753 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
EPHB3P54753 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
EPHB3P54753 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
EPHB3P54753 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
EPHB3P54753 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
EPHB3P54753 RPL23P2-201ENST00000320371 421 ntBASIC5.73□□□□□ -1.49
EPHB3P54753 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
EPHB3P54753 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.73□□□□□ -1.49
EPHB3P54753 RNU6-501P-201ENST00000364072 100 ntBASIC5.73□□□□□ -1.49
EPHB3P54753 RNU1-149P-201ENST00000390870 161 ntBASIC5.73□□□□□ -1.49
EPHB3P54753 AL645927.1-201ENST00000396783 406 ntBASIC5.73□□□□□ -1.49
EPHB3P54753 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.73□□□□□ -1.49
EPHB3P54753 RNU6-248P-201ENST00000410720 107 ntBASIC5.73□□□□□ -1.49
EPHB3P54753 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.73□□□□□ -1.49
EPHB3P54753 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC5.73□□□□□ -1.49
EPHB3P54753 RPL17P12-201ENST00000413391 526 ntBASIC5.73□□□□□ -1.49
EPHB3P54753 OR10T1P-201ENST00000424327 947 ntBASIC5.73□□□□□ -1.49
EPHB3P54753 AC093655.2-201ENST00000425735 631 ntBASIC5.73□□□□□ -1.49
EPHB3P54753 AC005033.1-201ENST00000428904 813 ntBASIC5.73□□□□□ -1.49
EPHB3P54753 AL365184.2-201ENST00000431139 435 ntBASIC5.73□□□□□ -1.49
EPHB3P54753 RPL12P17-201ENST00000432393 498 ntBASIC5.73□□□□□ -1.49
EPHB3P54753 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.73□□□□□ -1.49
EPHB3P54753 YWHAZP2-201ENST00000440317 728 ntBASIC5.73□□□□□ -1.49
EPHB3P54753 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.73□□□□□ -1.49
EPHB3P54753 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC5.73□□□□□ -1.49
EPHB3P54753 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.73□□□□□ -1.49
EPHB3P54753 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
EPHB3P54753 GAPDHP39-201ENST00000481866 979 ntBASIC5.73□□□□□ -1.49
EPHB3P54753 RPSAP50-201ENST00000481955 852 ntBASIC5.73□□□□□ -1.49
EPHB3P54753 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.73□□□□□ -1.49
EPHB3P54753 RNF138P1-201ENST00000502765 546 ntBASIC5.73□□□□□ -1.49
EPHB3P54753 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
EPHB3P54753 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
EPHB3P54753 RN7SKP67-201ENST00000515905 235 ntBASIC5.73□□□□□ -1.49
EPHB3P54753 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.73□□□□□ -1.49
EPHB3P54753 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC5.73□□□□□ -1.49
EPHB3P54753 OR5AQ1P-201ENST00000527596 927 ntBASIC5.73□□□□□ -1.49
EPHB3P54753 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC5.73□□□□□ -1.49
EPHB3P54753 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC5.73□□□□□ -1.49
EPHB3P54753 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.73□□□□□ -1.49
EPHB3P54753 HMGN2P47-201ENST00000559378 272 ntBASIC5.73□□□□□ -1.49
EPHB3P54753 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.73□□□□□ -1.49
EPHB3P54753 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.73□□□□□ -1.49
EPHB3P54753 AC005341.1-201ENST00000571086 708 ntBASIC5.73□□□□□ -1.49
EPHB3P54753 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
EPHB3P54753 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC5.73□□□□□ -1.49
EPHB3P54753 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC5.73□□□□□ -1.49
EPHB3P54753 AC060780.3-201ENST00000589464 80 ntBASIC5.73□□□□□ -1.49
EPHB3P54753 AC022432.1-201ENST00000595739 310 ntBASIC5.73□□□□□ -1.49
EPHB3P54753 AC012557.1-201ENST00000607115 611 ntBASIC5.73□□□□□ -1.49
EPHB3P54753 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC5.73□□□□□ -1.49
EPHB3P54753 AC109583.2-201ENST00000617367 129 ntBASIC5.73□□□□□ -1.49
EPHB3P54753 AL158209.2-201ENST00000619266 216 ntBASIC5.73□□□□□ -1.49
EPHB3P54753 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
EPHB3P54753 AC011493.1-201ENST00000596753 1632 ntBASIC5.73□□□□□ -1.49
EPHB3P54753 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
EPHB3P54753 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
EPHB3P54753 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
EPHB3P54753 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
EPHB3P54753 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
EPHB3P54753 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
EPHB3P54753 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
EPHB3P54753 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
EPHB3P54753 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.72□□□□□ -1.49
EPHB3P54753 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
EPHB3P54753 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
EPHB3P54753 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.72□□□□□ -1.49
EPHB3P54753 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
EPHB3P54753 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
EPHB3P54753 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
EPHB3P54753 SNORA63-201ENST00000363450 132 ntBASIC5.72□□□□□ -1.49
EPHB3P54753 Y_RNA.162-201ENST00000363683 102 ntBASIC5.72□□□□□ -1.49
EPHB3P54753 RNA5SP487-201ENST00000410186 122 ntBASIC5.72□□□□□ -1.49
EPHB3P54753 RIMKLBP2-201ENST00000424737 654 ntBASIC5.72□□□□□ -1.49
EPHB3P54753 RPL7P56-201ENST00000429441 717 ntBASIC5.72□□□□□ -1.49
EPHB3P54753 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.72□□□□□ -1.49
EPHB3P54753 AL050321.1-201ENST00000432363 400 ntBASIC5.72□□□□□ -1.49
EPHB3P54753 RN7SL329P-201ENST00000467740 299 ntBASIC5.72□□□□□ -1.49
EPHB3P54753 AC093270.2-201ENST00000486157 792 ntBASIC5.72□□□□□ -1.49
EPHB3P54753 AC004453.1-201ENST00000487895 408 ntBASIC5.72□□□□□ -1.49
EPHB3P54753 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC5.72□□□□□ -1.49
EPHB3P54753 NIPA2P2-201ENST00000496376 1083 ntBASIC5.72□□□□□ -1.49
EPHB3P54753 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.72□□□□□ -1.49
EPHB3P54753 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.72□□□□□ -1.49
EPHB3P54753 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms