Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.6□□□□□ -1.67
LIMK1P53667 DEFB130D-201ENST00000426866 237 ntBASIC4.6□□□□□ -1.67
LIMK1P53667 AC011998.1-201ENST00000433403 117 ntBASIC4.6□□□□□ -1.67
LIMK1P53667 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.6□□□□□ -1.67
LIMK1P53667 H2AFZP5-201ENST00000446960 382 ntBASIC4.6□□□□□ -1.67
LIMK1P53667 RPL37P3-201ENST00000456825 293 ntBASIC4.6□□□□□ -1.67
LIMK1P53667 RPS17P2-201ENST00000461663 408 ntBASIC4.6□□□□□ -1.67
LIMK1P53667 RPS7P7-201ENST00000463499 571 ntBASIC4.6□□□□□ -1.67
LIMK1P53667 AP000926.1-201ENST00000479573 241 ntBASIC4.6□□□□□ -1.67
LIMK1P53667 AC105137.1-201ENST00000484355 562 ntBASIC4.6□□□□□ -1.67
LIMK1P53667 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.6□□□□□ -1.67
LIMK1P53667 AC010374.1-201ENST00000503762 1237 ntBASIC4.6□□□□□ -1.67
LIMK1P53667 AC104108.1-201ENST00000509930 412 ntBASIC4.6□□□□□ -1.67
LIMK1P53667 AC010476.1-201ENST00000519111 851 ntBASIC4.6□□□□□ -1.67
LIMK1P53667 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.6□□□□□ -1.67
LIMK1P53667 IGKV2-36-201ENST00000519999 223 ntBASIC4.6□□□□□ -1.67
LIMK1P53667 OR8G5-201ENST00000524943 1041 ntBASIC4.6□□□□□ -1.67
LIMK1P53667 AP000889.1-201ENST00000530968 660 ntBASIC4.6□□□□□ -1.67
LIMK1P53667 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LIMK1P53667 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.6□□□□□ -1.67
LIMK1P53667 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.6□□□□□ -1.67
LIMK1P53667 AL049839.1-201ENST00000556151 657 ntBASIC4.6□□□□□ -1.67
LIMK1P53667 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.6□□□□□ -1.67
LIMK1P53667 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.6□□□□□ -1.67
LIMK1P53667 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.6□□□□□ -1.67
LIMK1P53667 AC124283.4-201ENST00000581815 456 ntBASIC4.6□□□□□ -1.67
LIMK1P53667 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.6□□□□□ -1.67
LIMK1P53667 AP003117.1-201ENST00000602771 554 ntBASIC4.6□□□□□ -1.67
LIMK1P53667 AL591034.3-201ENST00000605511 685 ntBASIC4.6□□□□□ -1.67
LIMK1P53667 AC021851.1-201ENST00000608537 1082 ntBASIC4.6□□□□□ -1.67
LIMK1P53667 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.6□□□□□ -1.67
LIMK1P53667 MIR3653-201ENST00000625572 110 ntBASIC4.6□□□□□ -1.67
LIMK1P53667 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
LIMK1P53667 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.6□□□□□ -1.67
LIMK1P53667 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC4.6□□□□□ -1.67
LIMK1P53667 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LIMK1P53667 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LIMK1P53667 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LIMK1P53667 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LIMK1P53667 MFSD8-242ENST00000641690 4199 ntBASIC4.6□□□□□ -1.67
LIMK1P53667 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LIMK1P53667 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.6□□□□□ -1.67
LIMK1P53667 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.59□□□□□ -1.67
LIMK1P53667 AC006971.1-201ENST00000407916 4486 ntBASIC4.59□□□□□ -1.67
LIMK1P53667 RNA5SP366-201ENST00000365454 123 ntBASIC4.59□□□□□ -1.67
LIMK1P53667 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.59□□□□□ -1.67
LIMK1P53667 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
LIMK1P53667 MIR554-201ENST00000384874 96 ntBASIC4.59□□□□□ -1.67
LIMK1P53667 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LIMK1P53667 SDHCP2-201ENST00000398565 501 ntBASIC4.59□□□□□ -1.67
LIMK1P53667 AL035079.1-201ENST00000405210 287 ntBASIC4.59□□□□□ -1.67
LIMK1P53667 RPL23AP26-201ENST00000412728 464 ntBASIC4.59□□□□□ -1.67
LIMK1P53667 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
LIMK1P53667 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.59□□□□□ -1.67
LIMK1P53667 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.59□□□□□ -1.67
LIMK1P53667 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC4.59□□□□□ -1.67
LIMK1P53667 HMGN1P5-201ENST00000448591 263 ntBASIC4.59□□□□□ -1.67
LIMK1P53667 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.59□□□□□ -1.67
LIMK1P53667 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.59□□□□□ -1.67
LIMK1P53667 AC012170.1-201ENST00000495139 359 ntBASIC4.59□□□□□ -1.67
LIMK1P53667 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LIMK1P53667 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LIMK1P53667 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LIMK1P53667 RNA5SP249-201ENST00000516127 99 ntBASIC4.59□□□□□ -1.67
LIMK1P53667 AC023632.4-201ENST00000517783 191 ntBASIC4.59□□□□□ -1.67
LIMK1P53667 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC4.59□□□□□ -1.67
LIMK1P53667 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LIMK1P53667 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.59□□□□□ -1.67
LIMK1P53667 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.59□□□□□ -1.67
LIMK1P53667 PCNAP1-202ENST00000595299 752 ntBASIC4.59□□□□□ -1.67
LIMK1P53667 AC125494.3-201ENST00000602759 455 ntBASIC4.59□□□□□ -1.67
LIMK1P53667 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.59□□□□□ -1.67
LIMK1P53667 AL133445.2-201ENST00000611191 527 ntBASIC4.59□□□□□ -1.67
LIMK1P53667 AL022401.1-201ENST00000619498 108 ntBASIC4.59□□□□□ -1.67
LIMK1P53667 AC068880.4-201ENST00000623082 495 ntBASIC4.59□□□□□ -1.67
LIMK1P53667 AC024595.1-201ENST00000623088 387 ntBASIC4.59□□□□□ -1.67
LIMK1P53667 AL356863.1-201ENST00000623378 1080 ntBASIC4.59□□□□□ -1.67
LIMK1P53667 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.59□□□□□ -1.67
LIMK1P53667 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.59□□□□□ -1.67
LIMK1P53667 U6.107-201ENST00000637108 79 ntBASIC4.59□□□□□ -1.67
LIMK1P53667 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
LIMK1P53667 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
LIMK1P53667 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
LIMK1P53667 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
LIMK1P53667 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
LIMK1P53667 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
LIMK1P53667 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.58□□□□□ -1.68
LIMK1P53667 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.58□□□□□ -1.68
LIMK1P53667 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
LIMK1P53667 MUC2-202ENST00000613187 4845 ntBASIC4.58□□□□□ -1.68
LIMK1P53667 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LIMK1P53667 AC017007.4-201ENST00000503353 1352 ntBASIC4.58□□□□□ -1.68
LIMK1P53667 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LIMK1P53667 SNORA73.1-201ENST00000363107 205 ntBASIC4.58□□□□□ -1.68
LIMK1P53667 Z98745.1-201ENST00000402553 494 ntBASIC4.58□□□□□ -1.68
LIMK1P53667 UQCRFS1P3-201ENST00000407697 385 ntBASIC4.58□□□□□ -1.68
LIMK1P53667 RN7SKP177-201ENST00000410567 355 ntBASIC4.58□□□□□ -1.68
LIMK1P53667 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.58□□□□□ -1.68
LIMK1P53667 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
LIMK1P53667 ELOCP6-201ENST00000429066 328 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms