Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.89□□□□□ -1.47
MRE11P49959 AADACP1-206ENST00000561502 1193 ntBASIC5.89□□□□□ -1.47
MRE11P49959 RBM22P12-201ENST00000567098 1255 ntBASIC5.89□□□□□ -1.47
MRE11P49959 AGGF1P4-201ENST00000568249 801 ntBASIC5.89□□□□□ -1.47
MRE11P49959 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.89□□□□□ -1.47
MRE11P49959 MTATP6P3-201ENST00000581686 676 ntBASIC5.89□□□□□ -1.47
MRE11P49959 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.89□□□□□ -1.47
MRE11P49959 AC005084.1-201ENST00000605160 304 ntBASIC5.89□□□□□ -1.47
MRE11P49959 AL109618.2-201ENST00000605527 211 ntBASIC5.89□□□□□ -1.47
MRE11P49959 OR2BH1P-201ENST00000608850 864 ntBASIC5.89□□□□□ -1.47
MRE11P49959 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC5.89□□□□□ -1.47
MRE11P49959 AC068831.8-201ENST00000620171 435 ntBASIC5.89□□□□□ -1.47
MRE11P49959 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
MRE11P49959 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
MRE11P49959 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
MRE11P49959 DHX9P1-201ENST00000436565 3076 ntBASIC5.89□□□□□ -1.47
MRE11P49959 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.89□□□□□ -1.47
MRE11P49959 AC114786.1-201ENST00000512892 1415 ntBASIC5.89□□□□□ -1.47
MRE11P49959 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
MRE11P49959 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.88□□□□□ -1.47
MRE11P49959 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
MRE11P49959 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
MRE11P49959 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
MRE11P49959 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
MRE11P49959 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
MRE11P49959 RN7SKP104-201ENST00000362605 328 ntBASIC5.88□□□□□ -1.47
MRE11P49959 RNU1-85P-201ENST00000364127 164 ntBASIC5.88□□□□□ -1.47
MRE11P49959 AC068538.1-201ENST00000376856 336 ntBASIC5.88□□□□□ -1.47
MRE11P49959 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
MRE11P49959 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
MRE11P49959 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
MRE11P49959 AL590084.2-201ENST00000401481 382 ntBASIC5.88□□□□□ -1.47
MRE11P49959 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
MRE11P49959 HMGB3P31-201ENST00000413333 595 ntBASIC5.88□□□□□ -1.47
MRE11P49959 AL590139.1-201ENST00000416267 400 ntBASIC5.88□□□□□ -1.47
MRE11P49959 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC5.88□□□□□ -1.47
MRE11P49959 DNAJC19P7-201ENST00000428811 344 ntBASIC5.88□□□□□ -1.47
MRE11P49959 AL022331.1-201ENST00000429025 477 ntBASIC5.88□□□□□ -1.47
MRE11P49959 C8orf59P1-201ENST00000429930 303 ntBASIC5.88□□□□□ -1.47
MRE11P49959 CYCSP6-201ENST00000434498 302 ntBASIC5.88□□□□□ -1.47
MRE11P49959 NMNAT1P2-201ENST00000435192 860 ntBASIC5.88□□□□□ -1.47
MRE11P49959 RPS26P2-201ENST00000440331 348 ntBASIC5.88□□□□□ -1.47
MRE11P49959 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.88□□□□□ -1.47
MRE11P49959 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.88□□□□□ -1.47
MRE11P49959 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.88□□□□□ -1.47
MRE11P49959 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.88□□□□□ -1.47
MRE11P49959 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.88□□□□□ -1.47
MRE11P49959 AC092324.1-201ENST00000468671 324 ntBASIC5.88□□□□□ -1.47
MRE11P49959 AC022034.3-201ENST00000471393 478 ntBASIC5.88□□□□□ -1.47
MRE11P49959 MTCYBP19-201ENST00000517463 1124 ntBASIC5.88□□□□□ -1.47
MRE11P49959 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.88□□□□□ -1.47
MRE11P49959 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.88□□□□□ -1.47
MRE11P49959 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.88□□□□□ -1.47
MRE11P49959 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC5.88□□□□□ -1.47
MRE11P49959 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.88□□□□□ -1.47
MRE11P49959 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.88□□□□□ -1.47
MRE11P49959 MIR3915-201ENST00000578518 97 ntBASIC5.88□□□□□ -1.47
MRE11P49959 ZNF415P1-201ENST00000582279 1166 ntBASIC5.88□□□□□ -1.47
MRE11P49959 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.88□□□□□ -1.47
MRE11P49959 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
MRE11P49959 AC104687.2-201ENST00000604442 342 ntBASIC5.88□□□□□ -1.47
MRE11P49959 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
MRE11P49959 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.88□□□□□ -1.47
MRE11P49959 AL031667.3-201ENST00000620124 655 ntBASIC5.88□□□□□ -1.47
MRE11P49959 ANKRD20A17P-201ENST00000511745 1330 ntBASIC5.88□□□□□ -1.47
MRE11P49959 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.88□□□□□ -1.47
MRE11P49959 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.88□□□□□ -1.47
MRE11P49959 CASC19-221ENST00000641309 1382 ntBASIC5.88□□□□□ -1.47
MRE11P49959 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
MRE11P49959 CASC19-206ENST00000641028 1430 ntBASIC5.88□□□□□ -1.47
MRE11P49959 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
MRE11P49959 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
MRE11P49959 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
MRE11P49959 AC104118.1-201ENST00000607625 1589 ntBASIC5.88□□□□□ -1.47
MRE11P49959 AC091046.3-201ENST00000631455 1574 ntBASIC5.88□□□□□ -1.47
MRE11P49959 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
MRE11P49959 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
MRE11P49959 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
MRE11P49959 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.87□□□□□ -1.47
MRE11P49959 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
MRE11P49959 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
MRE11P49959 AC107068.1-201ENST00000563286 4218 ntBASIC5.87□□□□□ -1.47
MRE11P49959 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
MRE11P49959 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.87□□□□□ -1.47
MRE11P49959 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.87□□□□□ -1.47
MRE11P49959 FAM3C2-201ENST00000312214 681 ntBASIC5.87□□□□□ -1.47
MRE11P49959 RNVU1-6-201ENST00000364688 164 ntBASIC5.87□□□□□ -1.47
MRE11P49959 RN7SKP6-201ENST00000364795 319 ntBASIC5.87□□□□□ -1.47
MRE11P49959 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
MRE11P49959 RNA5SP105-201ENST00000391123 113 ntBASIC5.87□□□□□ -1.47
MRE11P49959 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
MRE11P49959 RAD23BP2-201ENST00000416003 1207 ntBASIC5.87□□□□□ -1.47
MRE11P49959 TAF13P2-201ENST00000416876 286 ntBASIC5.87□□□□□ -1.47
MRE11P49959 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.87□□□□□ -1.47
MRE11P49959 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.87□□□□□ -1.47
MRE11P49959 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.87□□□□□ -1.47
MRE11P49959 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.87□□□□□ -1.47
MRE11P49959 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.87□□□□□ -1.47
MRE11P49959 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.87□□□□□ -1.47
MRE11P49959 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms