Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
TM4SF1P30408 MAPK10-286ENST00000641208 8747 ntBASIC5.17□□□□□ -1.58
TM4SF1P30408 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC5.17□□□□□ -1.58
TM4SF1P30408 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TM4SF1P30408 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.17□□□□□ -1.58
TM4SF1P30408 AC019072.1-201ENST00000604535 1551 ntBASIC5.16□□□□□ -1.58
TM4SF1P30408 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TM4SF1P30408 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
TM4SF1P30408 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.16□□□□□ -1.58
TM4SF1P30408 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TM4SF1P30408 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TM4SF1P30408 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TM4SF1P30408 AP002784.2-201ENST00000397300 549 ntBASIC5.16□□□□□ -1.58
TM4SF1P30408 AL590290.1-201ENST00000405336 380 ntBASIC5.16□□□□□ -1.58
TM4SF1P30408 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC5.16□□□□□ -1.58
TM4SF1P30408 GSTM3P2-201ENST00000412746 530 ntBASIC5.16□□□□□ -1.58
TM4SF1P30408 SYF2P2-201ENST00000417620 583 ntBASIC5.16□□□□□ -1.58
TM4SF1P30408 MTCO2P1-201ENST00000424648 477 ntBASIC5.16□□□□□ -1.58
TM4SF1P30408 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.16□□□□□ -1.58
TM4SF1P30408 NPM1P34-201ENST00000428821 893 ntBASIC5.16□□□□□ -1.58
TM4SF1P30408 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC5.16□□□□□ -1.58
TM4SF1P30408 AC092013.1-201ENST00000438795 332 ntBASIC5.16□□□□□ -1.58
TM4SF1P30408 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC5.16□□□□□ -1.58
TM4SF1P30408 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.16□□□□□ -1.58
TM4SF1P30408 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.16□□□□□ -1.58
TM4SF1P30408 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.16□□□□□ -1.58
TM4SF1P30408 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.16□□□□□ -1.58
TM4SF1P30408 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC5.16□□□□□ -1.58
TM4SF1P30408 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.16□□□□□ -1.58
TM4SF1P30408 AC108751.2-201ENST00000469993 231 ntBASIC5.16□□□□□ -1.58
TM4SF1P30408 RN7SL809P-201ENST00000482040 297 ntBASIC5.16□□□□□ -1.58
TM4SF1P30408 RPS4XP18-201ENST00000495480 763 ntBASIC5.16□□□□□ -1.58
TM4SF1P30408 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.16□□□□□ -1.58
TM4SF1P30408 AC121161.1-201ENST00000510606 652 ntBASIC5.16□□□□□ -1.58
TM4SF1P30408 C1DP5-201ENST00000525775 383 ntBASIC5.16□□□□□ -1.58
TM4SF1P30408 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.16□□□□□ -1.58
TM4SF1P30408 AL137072.1-201ENST00000603444 466 ntBASIC5.16□□□□□ -1.58
TM4SF1P30408 MIR6868-201ENST00000611215 58 ntBASIC5.16□□□□□ -1.58
TM4SF1P30408 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.16□□□□□ -1.58
TM4SF1P30408 AC106858.1-201ENST00000637497 429 ntBASIC5.16□□□□□ -1.58
TM4SF1P30408 AC132825.7-201ENST00000638744 335 ntBASIC5.16□□□□□ -1.58
TM4SF1P30408 AC000374.1-201ENST00000434698 1745 ntBASIC5.16□□□□□ -1.58
TM4SF1P30408 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TM4SF1P30408 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TM4SF1P30408 ZNF285B-201ENST00000561698 1767 ntBASIC5.16□□□□□ -1.58
TM4SF1P30408 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC5.15□□□□□ -1.58
TM4SF1P30408 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.58
TM4SF1P30408 AC024560.2-201ENST00000507981 1497 ntBASIC5.15□□□□□ -1.58
TM4SF1P30408 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
TM4SF1P30408 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
TM4SF1P30408 RN7SKP156-201ENST00000410308 342 ntBASIC5.15□□□□□ -1.59
TM4SF1P30408 SEC63P1-201ENST00000425785 1258 ntBASIC5.15□□□□□ -1.59
TM4SF1P30408 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC5.15□□□□□ -1.59
TM4SF1P30408 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.15□□□□□ -1.59
TM4SF1P30408 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC5.15□□□□□ -1.59
TM4SF1P30408 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.15□□□□□ -1.59
TM4SF1P30408 RNU6-1218P-201ENST00000458990 108 ntBASIC5.15□□□□□ -1.59
TM4SF1P30408 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC5.15□□□□□ -1.59
TM4SF1P30408 AC068339.2-201ENST00000534395 618 ntBASIC5.15□□□□□ -1.59
TM4SF1P30408 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.15□□□□□ -1.59
TM4SF1P30408 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.15□□□□□ -1.59
TM4SF1P30408 ZNF92P3-201ENST00000596594 954 ntBASIC5.15□□□□□ -1.59
TM4SF1P30408 AC124856.1-201ENST00000600819 896 ntBASIC5.15□□□□□ -1.59
TM4SF1P30408 SRGNP1-201ENST00000603392 451 ntBASIC5.15□□□□□ -1.59
TM4SF1P30408 AC019176.2-201ENST00000611579 315 ntBASIC5.15□□□□□ -1.59
TM4SF1P30408 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.15□□□□□ -1.59
TM4SF1P30408 AC095038.2-201ENST00000621464 1070 ntBASIC5.15□□□□□ -1.59
TM4SF1P30408 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TM4SF1P30408 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.15□□□□□ -1.59
TM4SF1P30408 MAPK10-349ENST00000641767 3661 ntBASIC5.15□□□□□ -1.59
TM4SF1P30408 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
TM4SF1P30408 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC5.15□□□□□ -1.59
TM4SF1P30408 AC009229.4-201ENST00000623854 1947 ntBASIC5.15□□□□□ -1.59
TM4SF1P30408 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TM4SF1P30408 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
TM4SF1P30408 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
TM4SF1P30408 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TM4SF1P30408 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
TM4SF1P30408 RNU1-44P-201ENST00000384453 163 ntBASIC5.14□□□□□ -1.59
TM4SF1P30408 BX664727.1-201ENST00000416024 466 ntBASIC5.14□□□□□ -1.59
TM4SF1P30408 EIF4A1P1-201ENST00000420241 934 ntBASIC5.14□□□□□ -1.59
TM4SF1P30408 ETF1P3-201ENST00000430422 1160 ntBASIC5.14□□□□□ -1.59
TM4SF1P30408 RPL7P29-201ENST00000437151 728 ntBASIC5.14□□□□□ -1.59
TM4SF1P30408 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.14□□□□□ -1.59
TM4SF1P30408 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.14□□□□□ -1.59
TM4SF1P30408 AL445433.1-201ENST00000457507 257 ntBASIC5.14□□□□□ -1.59
TM4SF1P30408 snoU13.24-201ENST00000458998 104 ntBASIC5.14□□□□□ -1.59
TM4SF1P30408 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.14□□□□□ -1.59
TM4SF1P30408 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.14□□□□□ -1.59
TM4SF1P30408 AC093853.1-201ENST00000515689 483 ntBASIC5.14□□□□□ -1.59
TM4SF1P30408 RNU6-352P-201ENST00000516908 107 ntBASIC5.14□□□□□ -1.59
TM4SF1P30408 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.14□□□□□ -1.59
TM4SF1P30408 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.14□□□□□ -1.59
TM4SF1P30408 AP002812.4-201ENST00000532139 286 ntBASIC5.14□□□□□ -1.59
TM4SF1P30408 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.14□□□□□ -1.59
TM4SF1P30408 AC106734.1-201ENST00000568646 663 ntBASIC5.14□□□□□ -1.59
TM4SF1P30408 MIR3200-201ENST00000580767 85 ntBASIC5.14□□□□□ -1.59
TM4SF1P30408 AC006116.7-201ENST00000590141 756 ntBASIC5.14□□□□□ -1.59
TM4SF1P30408 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC5.14□□□□□ -1.59
TM4SF1P30408 AC055764.2-201ENST00000610089 670 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms