Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
LIG1P18858 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
LIG1P18858 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LIG1P18858 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
LIG1P18858 AL121886.1-201ENST00000358609 435 ntBASIC6.48□□□□□ -1.37
LIG1P18858 Y_RNA.38-201ENST00000362617 102 ntBASIC6.48□□□□□ -1.37
LIG1P18858 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC6.48□□□□□ -1.37
LIG1P18858 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
LIG1P18858 SNORA40.3-201ENST00000390964 122 ntBASIC6.48□□□□□ -1.37
LIG1P18858 RNU6-1009P-201ENST00000390996 107 ntBASIC6.48□□□□□ -1.37
LIG1P18858 RNU6-876P-201ENST00000391295 104 ntBASIC6.48□□□□□ -1.37
LIG1P18858 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.48□□□□□ -1.37
LIG1P18858 METTL5-204ENST00000409340 472 ntTSL 5 BASIC6.48□□□□□ -1.37
LIG1P18858 RNA5SP296-201ENST00000410523 111 ntBASIC6.48□□□□□ -1.37
LIG1P18858 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC6.48□□□□□ -1.37
LIG1P18858 OFD1P18Y-201ENST00000420889 959 ntBASIC6.48□□□□□ -1.37
LIG1P18858 AC007742.1-201ENST00000425789 329 ntBASIC6.48□□□□□ -1.37
LIG1P18858 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LIG1P18858 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC6.48□□□□□ -1.37
LIG1P18858 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC6.48□□□□□ -1.37
LIG1P18858 ELOCP26-201ENST00000436067 329 ntBASIC6.48□□□□□ -1.37
LIG1P18858 CYCSP11-201ENST00000436426 315 ntBASIC6.48□□□□□ -1.37
LIG1P18858 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC6.48□□□□□ -1.37
LIG1P18858 AL022238.1-201ENST00000442557 355 ntBASIC6.48□□□□□ -1.37
LIG1P18858 RPL36AP39-201ENST00000445859 318 ntBASIC6.48□□□□□ -1.37
LIG1P18858 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC6.48□□□□□ -1.37
LIG1P18858 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.48□□□□□ -1.37
LIG1P18858 DPPA3P1-201ENST00000448050 469 ntBASIC6.48□□□□□ -1.37
LIG1P18858 AL033528.1-201ENST00000453780 140 ntBASIC6.48□□□□□ -1.37
LIG1P18858 AC083899.1-201ENST00000454465 3819 ntBASIC6.48□□□□□ -1.37
LIG1P18858 SNORD125-201ENST00000459538 96 ntBASIC6.48□□□□□ -1.37
LIG1P18858 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC6.48□□□□□ -1.37
LIG1P18858 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC6.48□□□□□ -1.37
LIG1P18858 MTND3P22-201ENST00000510932 243 ntBASIC6.48□□□□□ -1.37
LIG1P18858 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC6.48□□□□□ -1.37
LIG1P18858 AP002373.2-201ENST00000541631 1060 ntBASIC6.48□□□□□ -1.37
LIG1P18858 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC6.48□□□□□ -1.37
LIG1P18858 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.48□□□□□ -1.37
LIG1P18858 AL138976.2-201ENST00000563989 694 ntBASIC6.48□□□□□ -1.37
LIG1P18858 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.48□□□□□ -1.37
LIG1P18858 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC6.48□□□□□ -1.37
LIG1P18858 AL136221.1-201ENST00000621449 509 ntBASIC6.48□□□□□ -1.37
LIG1P18858 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.48□□□□□ -1.37
LIG1P18858 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
LIG1P18858 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC6.48□□□□□ -1.37
LIG1P18858 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.48□□□□□ -1.37
LIG1P18858 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC6.48□□□□□ -1.37
LIG1P18858 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LIG1P18858 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
LIG1P18858 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
LIG1P18858 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LIG1P18858 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
LIG1P18858 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.48□□□□□ -1.37
LIG1P18858 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
LIG1P18858 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.47□□□□□ -1.37
LIG1P18858 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
LIG1P18858 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
LIG1P18858 STX3-208ENST00000641815 3236 ntBASIC6.47□□□□□ -1.37
LIG1P18858 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
LIG1P18858 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC6.47□□□□□ -1.37
LIG1P18858 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC6.47□□□□□ -1.37
LIG1P18858 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.47□□□□□ -1.37
LIG1P18858 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LIG1P18858 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.47□□□□□ -1.37
LIG1P18858 RNU5F-6P-201ENST00000362979 116 ntBASIC6.47□□□□□ -1.37
LIG1P18858 RNU4-7P-201ENST00000364758 141 ntBASIC6.47□□□□□ -1.37
LIG1P18858 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.47□□□□□ -1.37
LIG1P18858 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
LIG1P18858 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.47□□□□□ -1.37
LIG1P18858 AC016739.1-201ENST00000405359 345 ntBASIC6.47□□□□□ -1.37
LIG1P18858 MRPL53P1-201ENST00000414323 319 ntBASIC6.47□□□□□ -1.37
LIG1P18858 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.47□□□□□ -1.37
LIG1P18858 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
LIG1P18858 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC6.47□□□□□ -1.37
LIG1P18858 DPY19L1P2-201ENST00000426647 915 ntBASIC6.47□□□□□ -1.37
LIG1P18858 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC6.47□□□□□ -1.37
LIG1P18858 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC6.47□□□□□ -1.37
LIG1P18858 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.47□□□□□ -1.37
LIG1P18858 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.47□□□□□ -1.37
LIG1P18858 NDUFB4P8-201ENST00000435351 367 ntBASIC6.47□□□□□ -1.37
LIG1P18858 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC6.47□□□□□ -1.37
LIG1P18858 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC6.47□□□□□ -1.37
LIG1P18858 MEMO1P4-201ENST00000453590 386 ntBASIC6.47□□□□□ -1.37
LIG1P18858 HNRNPDLP3-201ENST00000456745 380 ntBASIC6.47□□□□□ -1.37
LIG1P18858 AC011476.1-201ENST00000466725 307 ntBASIC6.47□□□□□ -1.37
LIG1P18858 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
LIG1P18858 MTHFD2P4-201ENST00000515074 1025 ntBASIC6.47□□□□□ -1.37
LIG1P18858 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
LIG1P18858 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.47□□□□□ -1.37
LIG1P18858 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.47□□□□□ -1.37
LIG1P18858 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC6.47□□□□□ -1.37
LIG1P18858 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC6.47□□□□□ -1.37
LIG1P18858 OSBPL9P2-201ENST00000526582 1228 ntBASIC6.47□□□□□ -1.37
LIG1P18858 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC6.47□□□□□ -1.37
LIG1P18858 OR8L1P-201ENST00000534005 955 ntBASIC6.47□□□□□ -1.37
LIG1P18858 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
LIG1P18858 AC091489.2-201ENST00000566263 604 ntBASIC6.47□□□□□ -1.37
LIG1P18858 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC6.47□□□□□ -1.37
LIG1P18858 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.47□□□□□ -1.37
LIG1P18858 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms