Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
COL5A2P05997 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
COL5A2P05997 AL512649.1-201ENST00000428997 581 ntBASIC4.9□□□□□ -1.62
COL5A2P05997 RN7SL807P-201ENST00000470923 297 ntBASIC4.9□□□□□ -1.62
COL5A2P05997 HIGD1AP18-201ENST00000520730 278 ntBASIC4.9□□□□□ -1.62
COL5A2P05997 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.9□□□□□ -1.62
COL5A2P05997 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.9□□□□□ -1.62
COL5A2P05997 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
COL5A2P05997 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC4.9□□□□□ -1.62
COL5A2P05997 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
COL5A2P05997 AC009852.2-201ENST00000567898 485 ntBASIC4.9□□□□□ -1.62
COL5A2P05997 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.9□□□□□ -1.62
COL5A2P05997 AC068020.1-201ENST00000594215 661 ntBASIC4.9□□□□□ -1.62
COL5A2P05997 AC026979.4-201ENST00000606555 645 ntBASIC4.9□□□□□ -1.62
COL5A2P05997 AC092574.1-201ENST00000609771 420 ntBASIC4.9□□□□□ -1.62
COL5A2P05997 AC020923.1-201ENST00000624021 917 ntBASIC4.9□□□□□ -1.62
COL5A2P05997 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
COL5A2P05997 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
COL5A2P05997 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
COL5A2P05997 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
COL5A2P05997 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC4.9□□□□□ -1.63
COL5A2P05997 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.9□□□□□ -1.63
COL5A2P05997 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.9□□□□□ -1.63
COL5A2P05997 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
COL5A2P05997 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
COL5A2P05997 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.89□□□□□ -1.63
COL5A2P05997 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL5A2P05997 RNU4-35P-201ENST00000362588 141 ntBASIC4.89□□□□□ -1.63
COL5A2P05997 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL5A2P05997 OR51A6P-201ENST00000418680 1004 ntBASIC4.89□□□□□ -1.63
COL5A2P05997 GNG5P5-201ENST00000420444 220 ntBASIC4.89□□□□□ -1.63
COL5A2P05997 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.89□□□□□ -1.63
COL5A2P05997 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL5A2P05997 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC4.89□□□□□ -1.63
COL5A2P05997 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.89□□□□□ -1.63
COL5A2P05997 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.89□□□□□ -1.63
COL5A2P05997 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.89□□□□□ -1.63
COL5A2P05997 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL5A2P05997 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.89□□□□□ -1.63
COL5A2P05997 AC027807.1-201ENST00000559921 996 ntBASIC4.89□□□□□ -1.63
COL5A2P05997 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.89□□□□□ -1.63
COL5A2P05997 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.89□□□□□ -1.63
COL5A2P05997 AC068790.5-201ENST00000602741 355 ntBASIC4.89□□□□□ -1.63
COL5A2P05997 AC105148.1-201ENST00000604961 409 ntBASIC4.89□□□□□ -1.63
COL5A2P05997 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.89□□□□□ -1.63
COL5A2P05997 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL5A2P05997 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
COL5A2P05997 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL5A2P05997 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL5A2P05997 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL5A2P05997 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL5A2P05997 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL5A2P05997 AP001642.1-201ENST00000624727 2117 ntBASIC4.89□□□□□ -1.63
COL5A2P05997 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
COL5A2P05997 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.88□□□□□ -1.63
COL5A2P05997 AC020633.1-201ENST00000468439 2247 ntBASIC4.88□□□□□ -1.63
COL5A2P05997 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
COL5A2P05997 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.88□□□□□ -1.63
COL5A2P05997 HSFY4P-201ENST00000415994 1181 ntBASIC4.88□□□□□ -1.63
COL5A2P05997 MAPRE1P3-201ENST00000435438 796 ntBASIC4.88□□□□□ -1.63
COL5A2P05997 AC108941.1-201ENST00000502853 530 ntBASIC4.88□□□□□ -1.63
COL5A2P05997 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.88□□□□□ -1.63
COL5A2P05997 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.88□□□□□ -1.63
COL5A2P05997 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.88□□□□□ -1.63
COL5A2P05997 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.88□□□□□ -1.63
COL5A2P05997 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC4.88□□□□□ -1.63
COL5A2P05997 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.88□□□□□ -1.63
COL5A2P05997 AL391001.1-201ENST00000602747 715 ntBASIC4.88□□□□□ -1.63
COL5A2P05997 AC115621.1-201ENST00000604653 858 ntBASIC4.88□□□□□ -1.63
COL5A2P05997 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
COL5A2P05997 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC4.88□□□□□ -1.63
COL5A2P05997 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL5A2P05997 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
COL5A2P05997 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.88□□□□□ -1.63
COL5A2P05997 AL133383.2-201ENST00000622958 2336 ntBASIC4.88□□□□□ -1.63
COL5A2P05997 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
COL5A2P05997 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.88□□□□□ -1.63
COL5A2P05997 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL5A2P05997 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.88□□□□□ -1.63
COL5A2P05997 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.88□□□□□ -1.63
COL5A2P05997 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL5A2P05997 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
COL5A2P05997 RNA5SP424-201ENST00000390988 115 ntBASIC4.88□□□□□ -1.63
COL5A2P05997 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.88□□□□□ -1.63
COL5A2P05997 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.88□□□□□ -1.63
COL5A2P05997 SDR42E1P3-201ENST00000438345 502 ntBASIC4.88□□□□□ -1.63
COL5A2P05997 VN1R25P-201ENST00000443385 738 ntBASIC4.88□□□□□ -1.63
COL5A2P05997 VN1R40P-201ENST00000455196 941 ntBASIC4.88□□□□□ -1.63
COL5A2P05997 AC089999.1-201ENST00000460336 374 ntBASIC4.88□□□□□ -1.63
COL5A2P05997 RPL21P10-201ENST00000463521 490 ntBASIC4.88□□□□□ -1.63
COL5A2P05997 AL136126.1-201ENST00000473603 402 ntBASIC4.88□□□□□ -1.63
COL5A2P05997 HESX1-202ENST00000473921 757 ntTSL 5 BASIC4.88□□□□□ -1.63
COL5A2P05997 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC4.88□□□□□ -1.63
COL5A2P05997 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.88□□□□□ -1.63
COL5A2P05997 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.88□□□□□ -1.63
COL5A2P05997 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
COL5A2P05997 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC4.88□□□□□ -1.63
COL5A2P05997 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC4.88□□□□□ -1.63
COL5A2P05997 AC008011.1-201ENST00000545989 227 ntBASIC4.88□□□□□ -1.63
COL5A2P05997 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms