Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TNFP01375 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TNFP01375 AC092111.2-201ENST00000611627 1414 ntBASIC3.68□□□□□ -1.82
TNFP01375 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.68□□□□□ -1.82
TNFP01375 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
TNFP01375 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TNFP01375 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TNFP01375 MAPK10-373ENST00000641983 6772 ntBASIC3.67□□□□□ -1.82
TNFP01375 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.67□□□□□ -1.82
TNFP01375 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
TNFP01375 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TNFP01375 AL356489.2-201ENST00000566968 3528 ntBASIC3.67□□□□□ -1.82
TNFP01375 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TNFP01375 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TNFP01375 GCNT6-201ENST00000379591 934 ntBASIC3.67□□□□□ -1.82
TNFP01375 RNA5SP424-201ENST00000390988 115 ntBASIC3.67□□□□□ -1.82
TNFP01375 SYF2P2-201ENST00000417620 583 ntBASIC3.67□□□□□ -1.82
TNFP01375 OR5AW1P-201ENST00000426334 1006 ntBASIC3.67□□□□□ -1.82
TNFP01375 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.67□□□□□ -1.82
TNFP01375 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.67□□□□□ -1.82
TNFP01375 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC3.67□□□□□ -1.82
TNFP01375 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.67□□□□□ -1.82
TNFP01375 AC018635.1-201ENST00000468292 1030 ntBASIC3.67□□□□□ -1.82
TNFP01375 AC084198.1-201ENST00000477747 402 ntBASIC3.67□□□□□ -1.82
TNFP01375 AC106707.2-201ENST00000484182 374 ntBASIC3.67□□□□□ -1.82
TNFP01375 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.67□□□□□ -1.82
TNFP01375 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
TNFP01375 AC007991.1-201ENST00000522680 631 ntBASIC3.67□□□□□ -1.82
TNFP01375 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.67□□□□□ -1.82
TNFP01375 IGKV2D-19-201ENST00000523346 262 ntBASIC3.67□□□□□ -1.82
TNFP01375 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.67□□□□□ -1.82
TNFP01375 AL121766.1-201ENST00000547436 487 ntBASIC3.67□□□□□ -1.82
TNFP01375 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.67□□□□□ -1.82
TNFP01375 GTF2IP22-201ENST00000554443 182 ntBASIC3.67□□□□□ -1.82
TNFP01375 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.67□□□□□ -1.82
TNFP01375 AC090877.1-201ENST00000561418 344 ntBASIC3.67□□□□□ -1.82
TNFP01375 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.67□□□□□ -1.82
TNFP01375 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
TNFP01375 OR1AB1P-201ENST00000585564 761 ntBASIC3.67□□□□□ -1.82
TNFP01375 AC244505.7-201ENST00000599675 272 ntBASIC3.67□□□□□ -1.82
TNFP01375 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.67□□□□□ -1.82
TNFP01375 AL137849.1-201ENST00000604767 169 ntBASIC3.67□□□□□ -1.82
TNFP01375 AC004777.1-201ENST00000624317 287 ntBASIC3.67□□□□□ -1.82
TNFP01375 AC020978.9-201ENST00000624380 1141 ntBASIC3.67□□□□□ -1.82
TNFP01375 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
TNFP01375 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TNFP01375 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TNFP01375 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.67□□□□□ -1.82
TNFP01375 ZNF962P-201ENST00000443465 3140 ntBASIC3.67□□□□□ -1.82
TNFP01375 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TNFP01375 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TNFP01375 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.66□□□□□ -1.82
TNFP01375 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
TNFP01375 RNA5SP51-201ENST00000364750 119 ntBASIC3.66□□□□□ -1.82
TNFP01375 MIR93-201ENST00000385024 80 ntBASIC3.66□□□□□ -1.82
TNFP01375 HLFP1-201ENST00000402375 499 ntBASIC3.66□□□□□ -1.82
TNFP01375 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TNFP01375 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
TNFP01375 RPS29P4-201ENST00000414733 161 ntBASIC3.66□□□□□ -1.82
TNFP01375 AC004552.1-201ENST00000419089 348 ntBASIC3.66□□□□□ -1.82
TNFP01375 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.66□□□□□ -1.82
TNFP01375 RPL6P5-201ENST00000445678 828 ntBASIC3.66□□□□□ -1.82
TNFP01375 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.66□□□□□ -1.82
TNFP01375 AC098824.1-201ENST00000453565 980 ntBASIC3.66□□□□□ -1.82
TNFP01375 RPS26P3-201ENST00000470205 348 ntBASIC3.66□□□□□ -1.82
TNFP01375 AC090543.2-201ENST00000483963 348 ntBASIC3.66□□□□□ -1.82
TNFP01375 AC004057.1-201ENST00000485827 348 ntBASIC3.66□□□□□ -1.82
TNFP01375 RPS6P4-201ENST00000494693 758 ntBASIC3.66□□□□□ -1.82
TNFP01375 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TNFP01375 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.66□□□□□ -1.82
TNFP01375 MTCYBP19-201ENST00000517463 1124 ntBASIC3.66□□□□□ -1.82
TNFP01375 AP000619.3-201ENST00000535634 1127 ntBASIC3.66□□□□□ -1.82
TNFP01375 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.66□□□□□ -1.82
TNFP01375 AC006960.3-201ENST00000561845 705 ntBASIC3.66□□□□□ -1.82
TNFP01375 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.66□□□□□ -1.82
TNFP01375 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.66□□□□□ -1.82
TNFP01375 AC010591.1-201ENST00000603941 649 ntBASIC3.66□□□□□ -1.82
TNFP01375 AL163642.2-201ENST00000604722 1019 ntBASIC3.66□□□□□ -1.82
TNFP01375 AC019176.2-201ENST00000611579 315 ntBASIC3.66□□□□□ -1.82
TNFP01375 AP002967.1-201ENST00000624203 539 ntBASIC3.66□□□□□ -1.82
TNFP01375 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.66□□□□□ -1.82
TNFP01375 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TNFP01375 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TNFP01375 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TNFP01375 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
TNFP01375 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
TNFP01375 AC107027.3-201ENST00000565095 3473 ntBASIC3.65□□□□□ -1.82
TNFP01375 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.82
TNFP01375 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.65□□□□□ -1.82
TNFP01375 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
TNFP01375 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
TNFP01375 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.65□□□□□ -1.82
TNFP01375 AC012020.1-201ENST00000624541 1728 ntBASIC3.65□□□□□ -1.82
TNFP01375 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TNFP01375 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC3.65□□□□□ -1.83
TNFP01375 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TNFP01375 RPL7P60-201ENST00000397636 735 ntBASIC3.65□□□□□ -1.83
TNFP01375 RPL23AP48-201ENST00000406913 488 ntBASIC3.65□□□□□ -1.83
TNFP01375 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.65□□□□□ -1.83
TNFP01375 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 145.4 ms