Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HCN1O60741 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
HCN1O60741 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.98□□□□□ -1.77
HCN1O60741 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.98□□□□□ -1.77
HCN1O60741 AC100871.1-201ENST00000507871 1456 ntBASIC3.98□□□□□ -1.77
HCN1O60741 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
HCN1O60741 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.97□□□□□ -1.77
HCN1O60741 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.97□□□□□ -1.77
HCN1O60741 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.97□□□□□ -1.77
HCN1O60741 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.97□□□□□ -1.77
HCN1O60741 RNA5SP388-201ENST00000362584 119 ntBASIC3.97□□□□□ -1.77
HCN1O60741 SNORA62.2-201ENST00000364672 152 ntBASIC3.97□□□□□ -1.77
HCN1O60741 SNORD51.1-201ENST00000365405 77 ntBASIC3.97□□□□□ -1.77
HCN1O60741 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.97□□□□□ -1.77
HCN1O60741 SNRPFP1-201ENST00000414761 252 ntBASIC3.97□□□□□ -1.77
HCN1O60741 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.97□□□□□ -1.77
HCN1O60741 MTND4P24-201ENST00000424002 397 ntBASIC3.97□□□□□ -1.77
HCN1O60741 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.97□□□□□ -1.77
HCN1O60741 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.97□□□□□ -1.77
HCN1O60741 RPS3AP54-201ENST00000435535 734 ntBASIC3.97□□□□□ -1.77
HCN1O60741 NUTF2P3-201ENST00000448540 384 ntBASIC3.97□□□□□ -1.77
HCN1O60741 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.97□□□□□ -1.77
HCN1O60741 AL133477.1-201ENST00000457472 514 ntBASIC3.97□□□□□ -1.77
HCN1O60741 AL672167.3-201ENST00000465951 960 ntBASIC3.97□□□□□ -1.77
HCN1O60741 AC091167.1-201ENST00000492017 396 ntBASIC3.97□□□□□ -1.77
HCN1O60741 AC023050.1-201ENST00000498198 304 ntBASIC3.97□□□□□ -1.77
HCN1O60741 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.97□□□□□ -1.77
HCN1O60741 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.97□□□□□ -1.77
HCN1O60741 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.97□□□□□ -1.77
HCN1O60741 HAUS1P3-201ENST00000523909 662 ntBASIC3.97□□□□□ -1.77
HCN1O60741 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC3.97□□□□□ -1.77
HCN1O60741 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.97□□□□□ -1.77
HCN1O60741 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.97□□□□□ -1.77
HCN1O60741 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.97□□□□□ -1.77
HCN1O60741 AL352979.3-201ENST00000553515 247 ntBASIC3.97□□□□□ -1.77
HCN1O60741 CKS1BP1-201ENST00000555221 240 ntBASIC3.97□□□□□ -1.77
HCN1O60741 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.97□□□□□ -1.77
HCN1O60741 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.97□□□□□ -1.77
HCN1O60741 AC025946.2-201ENST00000603398 234 ntBASIC3.97□□□□□ -1.77
HCN1O60741 AC083899.3-201ENST00000603413 594 ntBASIC3.97□□□□□ -1.77
HCN1O60741 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.97□□□□□ -1.77
HCN1O60741 AC078899.5-201ENST00000612475 178 ntBASIC3.97□□□□□ -1.77
HCN1O60741 AC025016.1-201ENST00000616746 682 ntBASIC3.97□□□□□ -1.77
HCN1O60741 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
HCN1O60741 AL445567.2-201ENST00000618935 498 ntBASIC3.97□□□□□ -1.77
HCN1O60741 HPVC1-201ENST00000629899 1198 ntBASIC3.97□□□□□ -1.77
HCN1O60741 OR52H1-202ENST00000641796 1061 ntBASIC3.97□□□□□ -1.77
HCN1O60741 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HCN1O60741 MAPK10-253ENST00000641010 4072 ntBASIC3.97□□□□□ -1.77
HCN1O60741 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
HCN1O60741 AL031985.3-201ENST00000565390 2449 ntBASIC3.96□□□□□ -1.77
HCN1O60741 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.77
HCN1O60741 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
HCN1O60741 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HCN1O60741 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
HCN1O60741 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.96□□□□□ -1.78
HCN1O60741 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.96□□□□□ -1.78
HCN1O60741 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.96□□□□□ -1.78
HCN1O60741 AC093311.1-201ENST00000506586 2021 ntBASIC3.96□□□□□ -1.78
HCN1O60741 MIR331-201ENST00000362302 94 ntBASIC3.96□□□□□ -1.78
HCN1O60741 U3.15-201ENST00000365398 212 ntBASIC3.96□□□□□ -1.78
HCN1O60741 RPS26P8-201ENST00000393490 348 ntBASIC3.96□□□□□ -1.78
HCN1O60741 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HCN1O60741 AC013404.1-201ENST00000413068 249 ntBASIC3.96□□□□□ -1.78
HCN1O60741 AC092647.1-201ENST00000420654 287 ntBASIC3.96□□□□□ -1.78
HCN1O60741 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.96□□□□□ -1.78
HCN1O60741 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.96□□□□□ -1.78
HCN1O60741 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.96□□□□□ -1.78
HCN1O60741 HMGB1P16-201ENST00000447155 540 ntBASIC3.96□□□□□ -1.78
HCN1O60741 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.96□□□□□ -1.78
HCN1O60741 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HCN1O60741 OR9N1P-202ENST00000494289 481 ntBASIC3.96□□□□□ -1.78
HCN1O60741 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.96□□□□□ -1.78
HCN1O60741 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.96□□□□□ -1.78
HCN1O60741 AC017037.1-201ENST00000508460 471 ntBASIC3.96□□□□□ -1.78
HCN1O60741 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.96□□□□□ -1.78
HCN1O60741 RNU6-1004P-201ENST00000516584 111 ntBASIC3.96□□□□□ -1.78
HCN1O60741 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.96□□□□□ -1.78
HCN1O60741 AP003730.1-201ENST00000524605 285 ntBASIC3.96□□□□□ -1.78
HCN1O60741 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.96□□□□□ -1.78
HCN1O60741 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.78
HCN1O60741 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.96□□□□□ -1.78
HCN1O60741 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.96□□□□□ -1.78
HCN1O60741 AC027176.2-201ENST00000559166 746 ntBASIC3.96□□□□□ -1.78
HCN1O60741 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.96□□□□□ -1.78
HCN1O60741 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HCN1O60741 AC069366.1-201ENST00000583159 838 ntBASIC3.96□□□□□ -1.78
HCN1O60741 AC005242.1-201ENST00000585658 438 ntBASIC3.96□□□□□ -1.78
HCN1O60741 AC040174.2-201ENST00000602701 465 ntBASIC3.96□□□□□ -1.78
HCN1O60741 ARF4P1-201ENST00000605447 541 ntBASIC3.96□□□□□ -1.78
HCN1O60741 MIR432-201ENST00000606207 94 ntBASIC3.96□□□□□ -1.78
HCN1O60741 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC3.96□□□□□ -1.78
HCN1O60741 AC243654.2-201ENST00000612843 443 ntBASIC3.96□□□□□ -1.78
HCN1O60741 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.96□□□□□ -1.78
HCN1O60741 AL163152.1-201ENST00000642001 374 ntBASIC3.96□□□□□ -1.78
HCN1O60741 MTND4P21-201ENST00000453886 1357 ntBASIC3.96□□□□□ -1.78
HCN1O60741 AC017007.4-201ENST00000503353 1352 ntBASIC3.96□□□□□ -1.78
HCN1O60741 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.96□□□□□ -1.78
HCN1O60741 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.96□□□□□ -1.78
HCN1O60741 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms