Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 AL512782.1-201ENST00000603093 364 ntBASIC4.17□□□□□ -1.74
LMX1BO60663 AC019131.2-201ENST00000609071 870 ntBASIC4.17□□□□□ -1.74
LMX1BO60663 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.17□□□□□ -1.74
LMX1BO60663 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.17□□□□□ -1.74
LMX1BO60663 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC4.17□□□□□ -1.74
LMX1BO60663 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.17□□□□□ -1.74
LMX1BO60663 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.17□□□□□ -1.74
LMX1BO60663 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.17□□□□□ -1.74
LMX1BO60663 AC092111.2-201ENST00000611627 1414 ntBASIC4.17□□□□□ -1.74
LMX1BO60663 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
LMX1BO60663 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
LMX1BO60663 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
LMX1BO60663 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
LMX1BO60663 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
LMX1BO60663 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.17□□□□□ -1.74
LMX1BO60663 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
LMX1BO60663 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
LMX1BO60663 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
LMX1BO60663 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LMX1BO60663 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LMX1BO60663 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
LMX1BO60663 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LMX1BO60663 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.16□□□□□ -1.74
LMX1BO60663 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.16□□□□□ -1.74
LMX1BO60663 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.16□□□□□ -1.74
LMX1BO60663 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LMX1BO60663 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LMX1BO60663 RPL32P3-201ENST00000359025 275 ntBASIC4.16□□□□□ -1.74
LMX1BO60663 RNU6-543P-201ENST00000362576 108 ntBASIC4.16□□□□□ -1.74
LMX1BO60663 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LMX1BO60663 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LMX1BO60663 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LMX1BO60663 AL080315.1-201ENST00000406055 466 ntBASIC4.16□□□□□ -1.74
LMX1BO60663 RNA5SP113-201ENST00000410486 84 ntBASIC4.16□□□□□ -1.74
LMX1BO60663 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.16□□□□□ -1.74
LMX1BO60663 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.16□□□□□ -1.74
LMX1BO60663 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.16□□□□□ -1.74
LMX1BO60663 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.16□□□□□ -1.74
LMX1BO60663 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.16□□□□□ -1.74
LMX1BO60663 AC093414.1-201ENST00000434712 514 ntBASIC4.16□□□□□ -1.74
LMX1BO60663 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.16□□□□□ -1.74
LMX1BO60663 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.16□□□□□ -1.74
LMX1BO60663 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.16□□□□□ -1.74
LMX1BO60663 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LMX1BO60663 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.16□□□□□ -1.74
LMX1BO60663 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.16□□□□□ -1.74
LMX1BO60663 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC4.16□□□□□ -1.74
LMX1BO60663 PSMC1P13-201ENST00000458195 985 ntBASIC4.16□□□□□ -1.74
LMX1BO60663 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.16□□□□□ -1.74
LMX1BO60663 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
LMX1BO60663 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.16□□□□□ -1.74
LMX1BO60663 snoU13.1-201ENST00000459157 104 ntBASIC4.16□□□□□ -1.74
LMX1BO60663 RPS23P7-201ENST00000466210 444 ntBASIC4.16□□□□□ -1.74
LMX1BO60663 RPS3AP43-201ENST00000479743 781 ntBASIC4.16□□□□□ -1.74
LMX1BO60663 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
LMX1BO60663 AC023050.1-201ENST00000498198 304 ntBASIC4.16□□□□□ -1.74
LMX1BO60663 RN7SKP46-201ENST00000515942 234 ntBASIC4.16□□□□□ -1.74
LMX1BO60663 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC4.16□□□□□ -1.74
LMX1BO60663 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.16□□□□□ -1.74
LMX1BO60663 MTCO3P15-201ENST00000526563 574 ntBASIC4.16□□□□□ -1.74
LMX1BO60663 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC4.16□□□□□ -1.74
LMX1BO60663 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.16□□□□□ -1.74
LMX1BO60663 AL049870.4-201ENST00000555741 486 ntBASIC4.16□□□□□ -1.74
LMX1BO60663 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.16□□□□□ -1.74
LMX1BO60663 AP005262.1-201ENST00000582646 997 ntBASIC4.16□□□□□ -1.74
LMX1BO60663 NBR2-204ENST00000587322 63 ntBASIC4.16□□□□□ -1.74
LMX1BO60663 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.16□□□□□ -1.74
LMX1BO60663 AC013562.2-201ENST00000611632 603 ntBASIC4.16□□□□□ -1.74
LMX1BO60663 AC008121.2-201ENST00000614647 523 ntBASIC4.16□□□□□ -1.74
LMX1BO60663 VN1R7P-201ENST00000619242 903 ntBASIC4.16□□□□□ -1.74
LMX1BO60663 AL158062.1-201ENST00000619632 745 ntBASIC4.16□□□□□ -1.74
LMX1BO60663 MIR6758-201ENST00000620653 63 ntBASIC4.16□□□□□ -1.74
LMX1BO60663 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.16□□□□□ -1.74
LMX1BO60663 OR1S1-201ENST00000624470 978 ntBASIC4.16□□□□□ -1.74
LMX1BO60663 AC016717.3-201ENST00000624730 554 ntBASIC4.16□□□□□ -1.74
LMX1BO60663 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.16□□□□□ -1.74
LMX1BO60663 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.16□□□□□ -1.74
LMX1BO60663 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LMX1BO60663 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
LMX1BO60663 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LMX1BO60663 DHX9P1-201ENST00000436565 3076 ntBASIC4.16□□□□□ -1.74
LMX1BO60663 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
LMX1BO60663 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.16□□□□□ -1.74
LMX1BO60663 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LMX1BO60663 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LMX1BO60663 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.16□□□□□ -1.74
LMX1BO60663 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
LMX1BO60663 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
LMX1BO60663 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
LMX1BO60663 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
LMX1BO60663 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
LMX1BO60663 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
LMX1BO60663 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.15□□□□□ -1.75
LMX1BO60663 FAM133CP-201ENST00000332869 704 ntBASIC4.15□□□□□ -1.75
LMX1BO60663 RNA5SP105-201ENST00000391123 113 ntBASIC4.15□□□□□ -1.75
LMX1BO60663 RPS3AP23-201ENST00000401762 784 ntBASIC4.15□□□□□ -1.75
LMX1BO60663 DNAJC19P6-201ENST00000401853 280 ntBASIC4.15□□□□□ -1.75
LMX1BO60663 HMGB3P18-201ENST00000406327 590 ntBASIC4.15□□□□□ -1.75
LMX1BO60663 SNORA11-201ENST00000408789 128 ntBASIC4.15□□□□□ -1.75
LMX1BO60663 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms