Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.2□□□□□ -1.74
PRKNO60260 AC084290.1-201ENST00000434995 374 ntBASIC4.2□□□□□ -1.74
PRKNO60260 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.2□□□□□ -1.74
PRKNO60260 CDY12P-201ENST00000440679 1015 ntBASIC4.2□□□□□ -1.74
PRKNO60260 CDY13P-201ENST00000445813 1015 ntBASIC4.2□□□□□ -1.74
PRKNO60260 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC4.2□□□□□ -1.74
PRKNO60260 PTENP1-201ENST00000447117 1215 ntBASIC4.2□□□□□ -1.74
PRKNO60260 AC112492.1-201ENST00000449607 712 ntBASIC4.2□□□□□ -1.74
PRKNO60260 AL162591.2-201ENST00000449634 317 ntBASIC4.2□□□□□ -1.74
PRKNO60260 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.2□□□□□ -1.74
PRKNO60260 CDY23P-201ENST00000451661 1014 ntBASIC4.2□□□□□ -1.74
PRKNO60260 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.2□□□□□ -1.74
PRKNO60260 VN1R40P-201ENST00000455196 941 ntBASIC4.2□□□□□ -1.74
PRKNO60260 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.2□□□□□ -1.74
PRKNO60260 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.2□□□□□ -1.74
PRKNO60260 AC108751.2-201ENST00000469993 231 ntBASIC4.2□□□□□ -1.74
PRKNO60260 RN7SL809P-201ENST00000482040 297 ntBASIC4.2□□□□□ -1.74
PRKNO60260 AC069528.1-202ENST00000482888 637 ntBASIC4.2□□□□□ -1.74
PRKNO60260 AC011037.1-201ENST00000483964 558 ntBASIC4.2□□□□□ -1.74
PRKNO60260 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.2□□□□□ -1.74
PRKNO60260 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.2□□□□□ -1.74
PRKNO60260 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.2□□□□□ -1.74
PRKNO60260 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4.2□□□□□ -1.74
PRKNO60260 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.2□□□□□ -1.74
PRKNO60260 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.2□□□□□ -1.74
PRKNO60260 IGKV2D-10-201ENST00000520194 281 ntBASIC4.2□□□□□ -1.74
PRKNO60260 MTCO3P15-201ENST00000526563 574 ntBASIC4.2□□□□□ -1.74
PRKNO60260 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.2□□□□□ -1.74
PRKNO60260 NPM1P47-201ENST00000560843 856 ntBASIC4.2□□□□□ -1.74
PRKNO60260 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.2□□□□□ -1.74
PRKNO60260 MTCO1P40-201ENST00000574371 625 ntBASIC4.2□□□□□ -1.74
PRKNO60260 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC4.2□□□□□ -1.74
PRKNO60260 AC015688.2-201ENST00000584523 262 ntBASIC4.2□□□□□ -1.74
PRKNO60260 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.2□□□□□ -1.74
PRKNO60260 AC061975.8-201ENST00000587058 721 ntBASIC4.2□□□□□ -1.74
PRKNO60260 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.2□□□□□ -1.74
PRKNO60260 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.2□□□□□ -1.74
PRKNO60260 ZNF92P3-201ENST00000596594 954 ntBASIC4.2□□□□□ -1.74
PRKNO60260 AC103792.1-201ENST00000603591 919 ntBASIC4.2□□□□□ -1.74
PRKNO60260 DUXAP3-201ENST00000603616 594 ntBASIC4.2□□□□□ -1.74
PRKNO60260 AC009948.4-201ENST00000604692 675 ntBASIC4.2□□□□□ -1.74
PRKNO60260 AL583856.2-201ENST00000606298 543 ntBASIC4.2□□□□□ -1.74
PRKNO60260 AC092106.3-201ENST00000611308 722 ntBASIC4.2□□□□□ -1.74
PRKNO60260 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.2□□□□□ -1.74
PRKNO60260 AC091304.6-201ENST00000619761 202 ntBASIC4.2□□□□□ -1.74
PRKNO60260 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PRKNO60260 AP003485.2-201ENST00000623636 610 ntBASIC4.2□□□□□ -1.74
PRKNO60260 AC093311.1-201ENST00000506586 2021 ntBASIC4.2□□□□□ -1.74
PRKNO60260 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.2□□□□□ -1.74
PRKNO60260 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.2□□□□□ -1.74
PRKNO60260 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.2□□□□□ -1.74
PRKNO60260 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PRKNO60260 CASC19-284ENST00000642142 1868 ntBASIC4.2□□□□□ -1.74
PRKNO60260 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
PRKNO60260 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.19□□□□□ -1.74
PRKNO60260 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.19□□□□□ -1.74
PRKNO60260 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PRKNO60260 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
PRKNO60260 ZNF876P-202ENST00000398732 1485 ntBASIC4.19□□□□□ -1.74
PRKNO60260 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
PRKNO60260 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PRKNO60260 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
PRKNO60260 FAM3C2-201ENST00000312214 681 ntBASIC4.19□□□□□ -1.74
PRKNO60260 RNA5SP151-201ENST00000365632 117 ntBASIC4.19□□□□□ -1.74
PRKNO60260 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PRKNO60260 RNU6-549P-201ENST00000384433 107 ntBASIC4.19□□□□□ -1.74
PRKNO60260 SNORD96B-201ENST00000386148 79 ntBASIC4.19□□□□□ -1.74
PRKNO60260 AC092745.2-202ENST00000411880 369 ntBASIC4.19□□□□□ -1.74
PRKNO60260 RPL21P108-201ENST00000413857 481 ntBASIC4.19□□□□□ -1.74
PRKNO60260 AL356320.2-201ENST00000417263 507 ntBASIC4.19□□□□□ -1.74
PRKNO60260 Z74021.1-201ENST00000423610 407 ntBASIC4.19□□□□□ -1.74
PRKNO60260 HIGD1AP4-201ENST00000430194 280 ntBASIC4.19□□□□□ -1.74
PRKNO60260 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.19□□□□□ -1.74
PRKNO60260 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.19□□□□□ -1.74
PRKNO60260 HMGB1P45-201ENST00000435986 653 ntBASIC4.19□□□□□ -1.74
PRKNO60260 AC002542.1-201ENST00000440683 193 ntBASIC4.19□□□□□ -1.74
PRKNO60260 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.19□□□□□ -1.74
PRKNO60260 RPL23AP43-201ENST00000446445 471 ntBASIC4.19□□□□□ -1.74
PRKNO60260 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.19□□□□□ -1.74
PRKNO60260 DNAJC19P8-201ENST00000452887 259 ntBASIC4.19□□□□□ -1.74
PRKNO60260 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PRKNO60260 AP000942.1-201ENST00000463969 747 ntBASIC4.19□□□□□ -1.74
PRKNO60260 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.19□□□□□ -1.74
PRKNO60260 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.19□□□□□ -1.74
PRKNO60260 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.19□□□□□ -1.74
PRKNO60260 AC091951.3-201ENST00000504093 246 ntBASIC4.19□□□□□ -1.74
PRKNO60260 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.19□□□□□ -1.74
PRKNO60260 AC092593.2-201ENST00000513866 913 ntBASIC4.19□□□□□ -1.74
PRKNO60260 snoZ278.1-201ENST00000517059 112 ntBASIC4.19□□□□□ -1.74
PRKNO60260 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.19□□□□□ -1.74
PRKNO60260 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.19□□□□□ -1.74
PRKNO60260 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.19□□□□□ -1.74
PRKNO60260 POLR2KP1-201ENST00000553226 168 ntBASIC4.19□□□□□ -1.74
PRKNO60260 MIR4277-201ENST00000578298 84 ntBASIC4.19□□□□□ -1.74
PRKNO60260 AC233702.9-201ENST00000581528 203 ntBASIC4.19□□□□□ -1.74
PRKNO60260 AC069366.1-201ENST00000583159 838 ntBASIC4.19□□□□□ -1.74
PRKNO60260 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.19□□□□□ -1.74
PRKNO60260 AC091057.2-201ENST00000602594 792 ntBASIC4.19□□□□□ -1.74
PRKNO60260 AL020997.3-201ENST00000602843 359 ntBASIC4.19□□□□□ -1.74
PRKNO60260 AL392112.1-201ENST00000605115 829 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms