Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 MIR1250-201ENST00000408098 113 ntBASIC4.35□□□□□ -1.71
RTCAO00442 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.35□□□□□ -1.71
RTCAO00442 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.35□□□□□ -1.71
RTCAO00442 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.35□□□□□ -1.71
RTCAO00442 AC241520.1-201ENST00000422654 1099 ntBASIC4.35□□□□□ -1.71
RTCAO00442 AC115285.1-201ENST00000424879 736 ntBASIC4.35□□□□□ -1.71
RTCAO00442 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.35□□□□□ -1.71
RTCAO00442 AP001324.1-201ENST00000428553 399 ntBASIC4.35□□□□□ -1.71
RTCAO00442 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.35□□□□□ -1.71
RTCAO00442 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.35□□□□□ -1.71
RTCAO00442 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.35□□□□□ -1.71
RTCAO00442 AL590399.6-201ENST00000446396 307 ntBASIC4.35□□□□□ -1.71
RTCAO00442 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.35□□□□□ -1.71
RTCAO00442 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.35□□□□□ -1.71
RTCAO00442 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.35□□□□□ -1.71
RTCAO00442 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
RTCAO00442 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.35□□□□□ -1.71
RTCAO00442 AC005921.1-201ENST00000510589 286 ntBASIC4.35□□□□□ -1.71
RTCAO00442 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.35□□□□□ -1.71
RTCAO00442 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.35□□□□□ -1.71
RTCAO00442 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.35□□□□□ -1.71
RTCAO00442 AC134698.5-201ENST00000519444 336 ntBASIC4.35□□□□□ -1.71
RTCAO00442 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.35□□□□□ -1.71
RTCAO00442 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.35□□□□□ -1.71
RTCAO00442 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.35□□□□□ -1.71
RTCAO00442 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.35□□□□□ -1.71
RTCAO00442 AL133338.2-201ENST00000604292 736 ntBASIC4.35□□□□□ -1.71
RTCAO00442 AC112503.2-201ENST00000609005 552 ntBASIC4.35□□□□□ -1.71
RTCAO00442 AL161616.1-201ENST00000611867 286 ntBASIC4.35□□□□□ -1.71
RTCAO00442 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
RTCAO00442 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
RTCAO00442 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
RTCAO00442 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
RTCAO00442 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.35□□□□□ -1.71
RTCAO00442 KARSP3-201ENST00000571212 1504 ntBASIC4.35□□□□□ -1.71
RTCAO00442 HSPD1P14-201ENST00000432666 1618 ntBASIC4.35□□□□□ -1.71
RTCAO00442 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.35□□□□□ -1.71
RTCAO00442 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
RTCAO00442 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.35□□□□□ -1.71
RTCAO00442 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.35□□□□□ -1.71
RTCAO00442 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
RTCAO00442 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.35□□□□□ -1.71
RTCAO00442 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RTCAO00442 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
RTCAO00442 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
RTCAO00442 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RTCAO00442 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RTCAO00442 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RTCAO00442 RNU6-1257P-201ENST00000384625 110 ntBASIC4.34□□□□□ -1.71
RTCAO00442 AL133270.1-201ENST00000402635 279 ntBASIC4.34□□□□□ -1.71
RTCAO00442 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.34□□□□□ -1.71
RTCAO00442 RBMY2KP-201ENST00000418221 992 ntBASIC4.34□□□□□ -1.71
RTCAO00442 CYP4F29P-201ENST00000420685 446 ntBASIC4.34□□□□□ -1.71
RTCAO00442 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.34□□□□□ -1.71
RTCAO00442 HSFY7P-201ENST00000432672 318 ntBASIC4.34□□□□□ -1.71
RTCAO00442 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.34□□□□□ -1.71
RTCAO00442 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.34□□□□□ -1.71
RTCAO00442 HSFY8P-201ENST00000437934 318 ntBASIC4.34□□□□□ -1.71
RTCAO00442 AL772161.1-201ENST00000439130 476 ntBASIC4.34□□□□□ -1.71
RTCAO00442 RPL23AP93-201ENST00000440847 484 ntBASIC4.34□□□□□ -1.71
RTCAO00442 RPS26P56-201ENST00000444468 240 ntBASIC4.34□□□□□ -1.71
RTCAO00442 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RTCAO00442 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.34□□□□□ -1.71
RTCAO00442 HSFY5P-201ENST00000453726 309 ntBASIC4.34□□□□□ -1.71
RTCAO00442 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RTCAO00442 RPL32P14-201ENST00000463196 378 ntBASIC4.34□□□□□ -1.71
RTCAO00442 AC073522.1-201ENST00000483312 377 ntBASIC4.34□□□□□ -1.71
RTCAO00442 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.34□□□□□ -1.71
RTCAO00442 RNA5SP446-201ENST00000515955 82 ntBASIC4.34□□□□□ -1.71
RTCAO00442 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.34□□□□□ -1.71
RTCAO00442 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.34□□□□□ -1.71
RTCAO00442 AP001781.1-201ENST00000530977 207 ntBASIC4.34□□□□□ -1.71
RTCAO00442 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.34□□□□□ -1.71
RTCAO00442 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RTCAO00442 CBX3P5-201ENST00000552017 521 ntBASIC4.34□□□□□ -1.71
RTCAO00442 ATP5F1P7-201ENST00000567330 760 ntBASIC4.34□□□□□ -1.71
RTCAO00442 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.34□□□□□ -1.71
RTCAO00442 AC007687.1-201ENST00000602704 304 ntBASIC4.34□□□□□ -1.71
RTCAO00442 AC091488.1-201ENST00000604239 660 ntBASIC4.34□□□□□ -1.71
RTCAO00442 AC018754.1-201ENST00000607486 925 ntBASIC4.34□□□□□ -1.71
RTCAO00442 AC006213.4-201ENST00000616184 634 ntBASIC4.34□□□□□ -1.71
RTCAO00442 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RTCAO00442 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RTCAO00442 MIR6730-201ENST00000622213 67 ntBASIC4.34□□□□□ -1.71
RTCAO00442 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
RTCAO00442 AC108751.5-201ENST00000492880 1336 ntBASIC4.34□□□□□ -1.71
RTCAO00442 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.34□□□□□ -1.71
RTCAO00442 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RTCAO00442 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RTCAO00442 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.34□□□□□ -1.72
RTCAO00442 AC011266.1-201ENST00000624119 3569 ntBASIC4.34□□□□□ -1.72
RTCAO00442 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.34□□□□□ -1.72
RTCAO00442 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.33□□□□□ -1.72
RTCAO00442 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.33□□□□□ -1.72
RTCAO00442 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.33□□□□□ -1.72
RTCAO00442 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
RTCAO00442 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.33□□□□□ -1.72
RTCAO00442 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RTCAO00442 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
RTCAO00442 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms