Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.14□□□□□ -1.75
NPIPA3F8WFD2 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.14□□□□□ -1.75
NPIPA3F8WFD2 ATP5J2P6-201ENST00000565203 266 ntBASIC4.14□□□□□ -1.75
NPIPA3F8WFD2 MIR4716-201ENST00000579628 84 ntBASIC4.14□□□□□ -1.75
NPIPA3F8WFD2 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.14□□□□□ -1.75
NPIPA3F8WFD2 AC011477.5-201ENST00000586571 259 ntBASIC4.14□□□□□ -1.75
NPIPA3F8WFD2 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.14□□□□□ -1.75
NPIPA3F8WFD2 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.14□□□□□ -1.75
NPIPA3F8WFD2 AL158050.2-201ENST00000605336 568 ntBASIC4.14□□□□□ -1.75
NPIPA3F8WFD2 AC013468.1-201ENST00000608680 598 ntBASIC4.14□□□□□ -1.75
NPIPA3F8WFD2 AC009269.6-201ENST00000621778 588 ntBASIC4.14□□□□□ -1.75
NPIPA3F8WFD2 AC015871.5-202ENST00000623252 701 ntBASIC4.14□□□□□ -1.75
NPIPA3F8WFD2 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.14□□□□□ -1.75
NPIPA3F8WFD2 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
NPIPA3F8WFD2 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NPIPA3F8WFD2 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.14□□□□□ -1.75
NPIPA3F8WFD2 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NPIPA3F8WFD2 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NPIPA3F8WFD2 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NPIPA3F8WFD2 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 AL049737.1-201ENST00000413920 1403 ntBASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 NSRP1P1-201ENST00000444067 1693 ntBASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 AC092435.4-201ENST00000623012 4159 ntBASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 AC026951.1-201ENST00000559530 2459 ntBASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 RNU6-1257P-201ENST00000384625 110 ntBASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 RPS24P12-201ENST00000402084 394 ntBASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 AL359643.1-201ENST00000404109 423 ntBASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 AC092638.1-201ENST00000411966 1275 ntBASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 AC115285.1-201ENST00000424879 736 ntBASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 FCF1P6-201ENST00000456841 595 ntBASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 RPL23AP24-201ENST00000458203 385 ntBASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 AC023050.1-201ENST00000498198 304 ntBASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 SUMO2P5-201ENST00000506790 245 ntBASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 AC069306.1-201ENST00000507006 843 ntBASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 TOMM20P2-201ENST00000540082 421 ntBASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 AC023575.1-201ENST00000580510 358 ntBASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 KPNA2P3-201ENST00000584190 848 ntBASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 AL590392.1-201ENST00000604960 446 ntBASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 AC006213.4-201ENST00000616184 634 ntBASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 AC018926.3-201ENST00000618841 406 ntBASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 AC022306.3-201ENST00000619930 550 ntBASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 AL356118.1-201ENST00000635272 1078 ntBASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 MAPK10-304ENST00000641341 3984 ntBASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 AL391684.1-202ENST00000641293 1636 ntBASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NPIPA3F8WFD2 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
NPIPA3F8WFD2 MFSD8-242ENST00000641690 4199 ntBASIC4.12□□□□□ -1.75
NPIPA3F8WFD2 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
NPIPA3F8WFD2 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
NPIPA3F8WFD2 AC046144.1-201ENST00000478559 1853 ntBASIC4.12□□□□□ -1.75
NPIPA3F8WFD2 AC074029.4-201ENST00000624796 1859 ntBASIC4.12□□□□□ -1.75
NPIPA3F8WFD2 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NPIPA3F8WFD2 OR56B2P-201ENST00000317102 954 ntBASIC4.12□□□□□ -1.75
NPIPA3F8WFD2 RNA5SP509-201ENST00000364577 119 ntBASIC4.12□□□□□ -1.75
NPIPA3F8WFD2 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.12□□□□□ -1.75
NPIPA3F8WFD2 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.12□□□□□ -1.75
NPIPA3F8WFD2 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.12□□□□□ -1.75
NPIPA3F8WFD2 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.12□□□□□ -1.75
NPIPA3F8WFD2 GAPDHP49-201ENST00000421421 961 ntBASIC4.12□□□□□ -1.75
NPIPA3F8WFD2 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.12□□□□□ -1.75
NPIPA3F8WFD2 PTP4A1P7-201ENST00000423476 514 ntBASIC4.12□□□□□ -1.75
NPIPA3F8WFD2 RPL7P4-203ENST00000430239 730 ntBASIC4.12□□□□□ -1.75
NPIPA3F8WFD2 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.12□□□□□ -1.75
NPIPA3F8WFD2 RPS26P40-201ENST00000435209 294 ntBASIC4.12□□□□□ -1.75
NPIPA3F8WFD2 TDGF1P1-201ENST00000445734 527 ntBASIC4.12□□□□□ -1.75
NPIPA3F8WFD2 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NPIPA3F8WFD2 RNU7-140P-201ENST00000459546 60 ntBASIC4.12□□□□□ -1.75
NPIPA3F8WFD2 AC108751.2-201ENST00000469993 231 ntBASIC4.12□□□□□ -1.75
NPIPA3F8WFD2 AC109327.1-201ENST00000471666 403 ntBASIC4.12□□□□□ -1.75
NPIPA3F8WFD2 AC103987.1-201ENST00000473394 348 ntBASIC4.12□□□□□ -1.75
NPIPA3F8WFD2 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.12□□□□□ -1.75
NPIPA3F8WFD2 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NPIPA3F8WFD2 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms