Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 AC092747.2-201ENST00000545069 983 ntBASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 MIR4480-201ENST00000582492 71 ntBASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 AC005255.1-201ENST00000593748 216 ntBASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 AC073091.2-201ENST00000603205 907 ntBASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 AL591424.2-201ENST00000617023 128 ntBASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 AC073342.3-201ENST00000624211 193 ntBASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 AC140479.6-201ENST00000633535 357 ntBASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 EXOC5P1-201ENST00000510543 1969 ntBASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 EIF2AP4-201ENST00000424793 1781 ntBASIC3.23□□□□□ -1.89
RBFOX3A6NFN3 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 MIR124-3-201ENST00000384866 87 ntBASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 HSPE1P8-201ENST00000406997 288 ntBASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 PRELID3BP11-201ENST00000414230 479 ntBASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 AL359265.2-201ENST00000434367 631 ntBASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 ACTR3P2-201ENST00000439585 1257 ntBASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 AC004801.2-202ENST00000463559 283 ntBASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 AC063943.1-201ENST00000465434 453 ntBASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 AC107398.1-201ENST00000486904 505 ntBASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 HMGB1P47-201ENST00000511281 589 ntBASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 RN7SKP276-201ENST00000516242 268 ntBASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 Vault.1-201ENST00000516474 102 ntBASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 RNA5SP309-201ENST00000516670 106 ntBASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 SOX5P1-201ENST00000524155 1127 ntBASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 BGLT3-201ENST00000564523 994 ntBASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 MIR3667-201ENST00000581025 74 ntBASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 AL512782.1-201ENST00000603093 364 ntBASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 AC105429.2-201ENST00000610567 517 ntBASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 AL592295.2-201ENST00000612578 206 ntBASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 RNVU1-4-201ENST00000612985 164 ntBASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 AC008013.2-202ENST00000637965 364 ntBASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 CEP170P1-201ENST00000502249 4587 ntBASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RBFOX3A6NFN3 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.89
RBFOX3A6NFN3 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
RBFOX3A6NFN3 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
RBFOX3A6NFN3 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.89
RBFOX3A6NFN3 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 MIR659-201ENST00000384963 97 ntBASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 AL109941.1-201ENST00000401925 229 ntBASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 AL590290.1-201ENST00000405336 380 ntBASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 BX510359.2-201ENST00000417920 305 ntBASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 RPL31P45-201ENST00000419532 356 ntBASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 AL732292.1-201ENST00000426692 226 ntBASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 ELOCP6-201ENST00000429066 328 ntBASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 TEX41-205ENST00000431734 529 ntTSL 4 BASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 AC023347.2-201ENST00000433994 462 ntBASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 AC008072.1-201ENST00000434254 824 ntBASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 SBDSP1-204ENST00000453858 737 ntBASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 RPL23AP81-201ENST00000455252 467 ntBASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 RPL36AP13-201ENST00000457490 317 ntBASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 ELOCP12-201ENST00000458706 328 ntBASIC3.21□□□□□ -1.9
RBFOX3A6NFN3 AC092324.1-201ENST00000468671 324 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms