Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC187A0A096LP49 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC187A0A096LP49 AC095050.2-201ENST00000510748 1458 ntBASIC4.86□□□□□ -1.63
CCDC187A0A096LP49 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC187A0A096LP49 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
CCDC187A0A096LP49 AC022031.1-201ENST00000585985 2593 ntBASIC4.86□□□□□ -1.63
CCDC187A0A096LP49 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC187A0A096LP49 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CCDC187A0A096LP49 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC187A0A096LP49 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CCDC187A0A096LP49 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC187A0A096LP49 PHKBP1-201ENST00000450951 1951 ntBASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 AC104260.2-201ENST00000623551 3497 ntBASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 RNA5SP505-201ENST00000364748 108 ntBASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 Y_RNA.604-201ENST00000410574 102 ntBASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 NRBF2P2-201ENST00000413087 861 ntBASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 AL139421.1-201ENST00000423010 169 ntBASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 AC007559.1-201ENST00000428736 355 ntBASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 AL136231.1-201ENST00000429407 730 ntBASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 AC091390.1-201ENST00000433904 331 ntBASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 UBE2D3P1-201ENST00000436669 444 ntBASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 YWHAZP7-201ENST00000436906 631 ntBASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 MTND5P2-201ENST00000442927 1142 ntBASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 TPT1P12-201ENST00000448968 492 ntBASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 AC104306.1-201ENST00000449702 371 ntBASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 AC073387.1-201ENST00000453261 709 ntBASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 RPL5P24-201ENST00000463742 885 ntBASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 RN7SL443P-201ENST00000464331 290 ntBASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 RPL23AP72-201ENST00000492447 435 ntBASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 RPF2P2-201ENST00000504693 896 ntBASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 WBP1LP4-201ENST00000505043 344 ntBASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 AC073358.1-201ENST00000505671 684 ntBASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 MTCYBP16-201ENST00000509187 1129 ntBASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 HMGN1P9-201ENST00000515212 298 ntBASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 AC087808.1-201ENST00000520501 361 ntBASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 AC092709.1-201ENST00000521355 1045 ntBASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 AC079171.1-201ENST00000568788 914 ntBASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 NBR2-204ENST00000587322 63 ntBASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 AC121247.2-201ENST00000604776 136 ntBASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 AL158042.1-201ENST00000605338 460 ntBASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 AL391358.1-201ENST00000605342 190 ntBASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 AL353600.1-201ENST00000608148 251 ntBASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 HULC.1-201ENST00000612720 240 ntBASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 AF001550.2-201ENST00000636643 217 ntBASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 MTND4P26-201ENST00000415971 1359 ntBASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 AP000776.1-201ENST00000530032 1663 ntBASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC187A0A096LP49 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
CCDC187A0A096LP49 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC187A0A096LP49 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
CCDC187A0A096LP49 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
CCDC187A0A096LP49 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CCDC187A0A096LP49 AC006206.1-201ENST00000544842 3387 ntBASIC4.84□□□□□ -1.63
CCDC187A0A096LP49 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC187A0A096LP49 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC187A0A096LP49 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.84□□□□□ -1.63
CCDC187A0A096LP49 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC187A0A096LP49 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.84□□□□□ -1.63
CCDC187A0A096LP49 SOCS5P3-201ENST00000425115 1576 ntBASIC4.84□□□□□ -1.63
CCDC187A0A096LP49 SGO1P2-201ENST00000429458 1589 ntBASIC4.84□□□□□ -1.63
CCDC187A0A096LP49 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC187A0A096LP49 Z99496.1-201ENST00000469424 1477 ntBASIC4.84□□□□□ -1.63
CCDC187A0A096LP49 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC187A0A096LP49 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC187A0A096LP49 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CCDC187A0A096LP49 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms