Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AURKAPS2-201ENST00000454983 333 ntBASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 NECAP1P2-201ENST00000455668 727 ntBASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 AC096741.1-201ENST00000472250 846 ntBASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 AC111193.1-201ENST00000504097 155 ntBASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 NDUFB4P12-201ENST00000513465 390 ntBASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 AC100784.1-201ENST00000522790 310 ntBASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 AC010306.1-201ENST00000523223 1117 ntBASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 AC124293.1-201ENST00000530034 493 ntBASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 PDCL2P2-201ENST00000533651 189 ntBASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 ERP27-202ENST00000540097 993 ntTSL 2 BASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 NBEAP1-201ENST00000554452 979 ntBASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 AC087465.1-201ENST00000560574 245 ntBASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 MTCO1P40-201ENST00000574371 625 ntBASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 AC011939.3-201ENST00000613686 466 ntBASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 AL392048.1-201ENST00000613946 534 ntBASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 Z98755.1-201ENST00000407015 1384 ntBASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
SSX2IPQ9Y2D8 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 NSRP1P1-201ENST00000444067 1693 ntBASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 HNRNPDP2-201ENST00000406475 478 ntBASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 AC114755.2-201ENST00000413520 361 ntBASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 AC027644.1-201ENST00000419595 298 ntBASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 AC093414.1-201ENST00000434712 514 ntBASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 FGF7P5-201ENST00000441829 291 ntBASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 HMGB1P48-201ENST00000446155 598 ntBASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 AL031584.1-201ENST00000447169 754 ntBASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 NPM1P39-201ENST00000449818 867 ntBASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 AL133477.1-201ENST00000457472 514 ntBASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 AC091959.2-201ENST00000477363 321 ntBASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 RPL23AP72-201ENST00000492447 435 ntBASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 AC091435.1-201ENST00000505442 584 ntBASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 OR5BM1P-201ENST00000512021 366 ntBASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 RN7SKP276-201ENST00000516242 268 ntBASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 C1GALT1P3-201ENST00000522049 819 ntBASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 AC107918.3-201ENST00000533272 382 ntBASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 AC008015.1-201ENST00000555505 465 ntBASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 NDUFAF4P1-201ENST00000559425 519 ntBASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 MIR5708-201ENST00000579723 85 ntBASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 MIR4697-201ENST00000582977 78 ntBASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 AL450489.1-201ENST00000612071 468 ntBASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 AL158163.2-201ENST00000619110 700 ntBASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 AC007671.2-201ENST00000637344 619 ntBASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 MFSD8-216ENST00000641147 4009 ntBASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
SSX2IPQ9Y2D8 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.27□□□□□ -1.57
SSX2IPQ9Y2D8 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms