Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
DUX4Q9UBX2 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.7□□□□□ -1.82
DUX4Q9UBX2 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.7□□□□□ -1.82
DUX4Q9UBX2 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
DUX4Q9UBX2 AL133412.1-201ENST00000380194 2992 ntBASIC3.7□□□□□ -1.82
DUX4Q9UBX2 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
DUX4Q9UBX2 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
DUX4Q9UBX2 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.7□□□□□ -1.82
DUX4Q9UBX2 RNU6-1279P-201ENST00000383917 103 ntBASIC3.7□□□□□ -1.82
DUX4Q9UBX2 AL356967.1-201ENST00000406305 431 ntBASIC3.7□□□□□ -1.82
DUX4Q9UBX2 SNORA3C-201ENST00000408792 125 ntBASIC3.7□□□□□ -1.82
DUX4Q9UBX2 RPS27AP7-201ENST00000422792 455 ntBASIC3.7□□□□□ -1.82
DUX4Q9UBX2 RBMY1KP-201ENST00000423480 476 ntBASIC3.7□□□□□ -1.82
DUX4Q9UBX2 BMS1P19-201ENST00000433925 393 ntBASIC3.7□□□□□ -1.82
DUX4Q9UBX2 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.7□□□□□ -1.82
DUX4Q9UBX2 CBX1P1-201ENST00000440184 427 ntBASIC3.7□□□□□ -1.82
DUX4Q9UBX2 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC3.7□□□□□ -1.82
DUX4Q9UBX2 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.7□□□□□ -1.82
DUX4Q9UBX2 CYCSP42-201ENST00000450823 238 ntBASIC3.7□□□□□ -1.82
DUX4Q9UBX2 DHFRP3-201ENST00000455595 559 ntBASIC3.7□□□□□ -1.82
DUX4Q9UBX2 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
DUX4Q9UBX2 SUMO1P1-201ENST00000497904 306 ntBASIC3.7□□□□□ -1.82
DUX4Q9UBX2 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.7□□□□□ -1.82
DUX4Q9UBX2 AC025674.1-201ENST00000507074 324 ntBASIC3.7□□□□□ -1.82
DUX4Q9UBX2 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.7□□□□□ -1.82
DUX4Q9UBX2 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.7□□□□□ -1.82
DUX4Q9UBX2 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
DUX4Q9UBX2 AC007424.1-203ENST00000554613 687 ntBASIC3.7□□□□□ -1.82
DUX4Q9UBX2 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
DUX4Q9UBX2 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.7□□□□□ -1.82
DUX4Q9UBX2 AC069366.1-201ENST00000583159 838 ntBASIC3.7□□□□□ -1.82
DUX4Q9UBX2 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.7□□□□□ -1.82
DUX4Q9UBX2 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.7□□□□□ -1.82
DUX4Q9UBX2 AL355816.1-201ENST00000607951 118 ntBASIC3.7□□□□□ -1.82
DUX4Q9UBX2 AC128687.2-201ENST00000609657 566 ntBASIC3.7□□□□□ -1.82
DUX4Q9UBX2 AC016911.1-201ENST00000613297 452 ntBASIC3.7□□□□□ -1.82
DUX4Q9UBX2 AP005019.3-201ENST00000620418 560 ntBASIC3.7□□□□□ -1.82
DUX4Q9UBX2 AC008785.1-201ENST00000624475 456 ntBASIC3.7□□□□□ -1.82
DUX4Q9UBX2 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
DUX4Q9UBX2 AC007529.1-201ENST00000418574 2178 ntBASIC3.7□□□□□ -1.82
DUX4Q9UBX2 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
DUX4Q9UBX2 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
DUX4Q9UBX2 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.7□□□□□ -1.82
DUX4Q9UBX2 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
DUX4Q9UBX2 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
DUX4Q9UBX2 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
DUX4Q9UBX2 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.69□□□□□ -1.82
DUX4Q9UBX2 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
DUX4Q9UBX2 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
DUX4Q9UBX2 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
DUX4Q9UBX2 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.69□□□□□ -1.82
DUX4Q9UBX2 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
DUX4Q9UBX2 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
DUX4Q9UBX2 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
DUX4Q9UBX2 OR11H4-201ENST00000315409 1082 ntBASIC3.69□□□□□ -1.82
DUX4Q9UBX2 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.69□□□□□ -1.82
DUX4Q9UBX2 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.69□□□□□ -1.82
DUX4Q9UBX2 RNU4-39P-201ENST00000362455 127 ntBASIC3.69□□□□□ -1.82
DUX4Q9UBX2 RNU4-74P-201ENST00000411280 161 ntBASIC3.69□□□□□ -1.82
DUX4Q9UBX2 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.69□□□□□ -1.82
DUX4Q9UBX2 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.69□□□□□ -1.82
DUX4Q9UBX2 VDAC1P6-201ENST00000430062 855 ntBASIC3.69□□□□□ -1.82
DUX4Q9UBX2 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.69□□□□□ -1.82
DUX4Q9UBX2 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.69□□□□□ -1.82
DUX4Q9UBX2 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
DUX4Q9UBX2 CEACAMP1-201ENST00000434624 1035 ntBASIC3.69□□□□□ -1.82
DUX4Q9UBX2 CBX1P4-201ENST00000439415 457 ntBASIC3.69□□□□□ -1.82
DUX4Q9UBX2 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.69□□□□□ -1.82
DUX4Q9UBX2 DDX39BP2-208ENST00000453923 258 ntBASIC3.69□□□□□ -1.82
DUX4Q9UBX2 AC006517.1-201ENST00000480485 328 ntBASIC3.69□□□□□ -1.82
DUX4Q9UBX2 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.69□□□□□ -1.82
DUX4Q9UBX2 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.69□□□□□ -1.82
DUX4Q9UBX2 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.69□□□□□ -1.82
DUX4Q9UBX2 AC022784.5-201ENST00000522241 437 ntBASIC3.69□□□□□ -1.82
DUX4Q9UBX2 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.69□□□□□ -1.82
DUX4Q9UBX2 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.69□□□□□ -1.82
DUX4Q9UBX2 AC021483.2-201ENST00000567415 758 ntBASIC3.69□□□□□ -1.82
DUX4Q9UBX2 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.69□□□□□ -1.82
DUX4Q9UBX2 MIR548Y-201ENST00000582739 110 ntBASIC3.69□□□□□ -1.82
DUX4Q9UBX2 MIR5096-201ENST00000583713 70 ntBASIC3.69□□□□□ -1.82
DUX4Q9UBX2 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.69□□□□□ -1.82
DUX4Q9UBX2 AL133247.2-201ENST00000603236 482 ntBASIC3.69□□□□□ -1.82
DUX4Q9UBX2 Z98200.1-201ENST00000607298 470 ntBASIC3.69□□□□□ -1.82
DUX4Q9UBX2 AL096803.3-201ENST00000609032 532 ntBASIC3.69□□□□□ -1.82
DUX4Q9UBX2 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.69□□□□□ -1.82
DUX4Q9UBX2 AC000123.2-201ENST00000623124 461 ntBASIC3.69□□□□□ -1.82
DUX4Q9UBX2 AC244205.2-202ENST00000635781 342 ntBASIC3.69□□□□□ -1.82
DUX4Q9UBX2 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.69□□□□□ -1.82
DUX4Q9UBX2 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
DUX4Q9UBX2 ZNF962P-201ENST00000443465 3140 ntBASIC3.69□□□□□ -1.82
DUX4Q9UBX2 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.69□□□□□ -1.82
DUX4Q9UBX2 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
DUX4Q9UBX2 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
DUX4Q9UBX2 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.68□□□□□ -1.82
DUX4Q9UBX2 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
DUX4Q9UBX2 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
DUX4Q9UBX2 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.68□□□□□ -1.82
DUX4Q9UBX2 HSPA8P1-201ENST00000425843 1833 ntBASIC3.68□□□□□ -1.82
DUX4Q9UBX2 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.68□□□□□ -1.82
DUX4Q9UBX2 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms