Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 RNU6-236P-201ENST00000363886 106 ntBASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 RNU1-32P-201ENST00000363937 159 ntBASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 Y_RNA.472-201ENST00000384322 102 ntBASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 Y_RNA.578-201ENST00000390903 88 ntBASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 U3.35-201ENST00000408405 208 ntBASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 RPL6P29-201ENST00000414863 865 ntBASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 E2F6P2-201ENST00000420708 748 ntBASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 RGS17P1-201ENST00000423358 553 ntBASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 AC093414.1-201ENST00000434712 514 ntBASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 PTGES3P1-201ENST00000439531 483 ntBASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 AC009263.1-201ENST00000441193 1239 ntBASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 TPT1P12-201ENST00000448968 492 ntBASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 AL591623.2-201ENST00000449978 222 ntBASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 AURKAPS2-201ENST00000454983 333 ntBASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 CDC42P1-201ENST00000456658 548 ntBASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 RNU7-140P-201ENST00000459546 60 ntBASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 AL161747.1-201ENST00000480068 358 ntBASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 AL035404.1-201ENST00000497982 568 ntBASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 AC119751.1-201ENST00000513357 765 ntBASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 DUXAP6-201ENST00000553858 601 ntBASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 AC090751.1-201ENST00000566966 267 ntBASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 MIR4697-201ENST00000582977 78 ntBASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 AL353778.1-201ENST00000603149 408 ntBASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 AC025588.2-201ENST00000604851 466 ntBASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 BNIP3P4-201ENST00000604946 565 ntBASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 AC100847.1-201ENST00000611316 481 ntBASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 AC123767.1-202ENST00000620407 817 ntBASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 LINC01109-201ENST00000603837 3081 ntBASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 AL672167.1-205ENST00000641112 3080 ntBASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 NSRP1P1-201ENST00000444067 1693 ntBASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 SCN1A-220ENST00000641603 12506 ntBASIC4.83□□□□□ -1.64
NCKIPSDQ9NZQ3 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 MTCO1P6-201ENST00000481192 1384 ntBASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 RNU4-68P-201ENST00000364314 141 ntBASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 AL592291.1-201ENST00000403830 352 ntBASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 SNORA11C-201ENST00000408532 129 ntBASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 RN7SKP247-201ENST00000411094 308 ntBASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 BTF3P8-201ENST00000414577 526 ntBASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 RPS3AP37-201ENST00000419176 745 ntBASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 AC073069.1-201ENST00000428657 441 ntBASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 TXNL1P1-201ENST00000429528 554 ntBASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 AC068287.1-201ENST00000430283 295 ntBASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 RPS6P15-201ENST00000431996 751 ntBASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 NRBF2P3-201ENST00000432731 865 ntBASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 RPS26P2-201ENST00000440331 348 ntBASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 ELOCP10-201ENST00000440624 327 ntBASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 RPS7P5-201ENST00000441482 581 ntBASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 RPS26P30-201ENST00000443431 335 ntBASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 AL929288.2-201ENST00000446368 407 ntBASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.82□□□□□ -1.64
NCKIPSDQ9NZQ3 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms