Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NDE1Q9NXR1 BNIP3P41-201ENST00000503774 571 ntBASIC4.13□□□□□ -1.75
NDE1Q9NXR1 AC010476.1-201ENST00000519111 851 ntBASIC4.13□□□□□ -1.75
NDE1Q9NXR1 IGHV3-32-201ENST00000519182 355 ntBASIC4.13□□□□□ -1.75
NDE1Q9NXR1 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.13□□□□□ -1.75
NDE1Q9NXR1 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NDE1Q9NXR1 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.13□□□□□ -1.75
NDE1Q9NXR1 AC006064.5-201ENST00000541782 248 ntBASIC4.13□□□□□ -1.75
NDE1Q9NXR1 EDDM3DP-201ENST00000554692 434 ntBASIC4.13□□□□□ -1.75
NDE1Q9NXR1 AC106734.1-201ENST00000568646 663 ntBASIC4.13□□□□□ -1.75
NDE1Q9NXR1 RN7SL339P-201ENST00000580597 296 ntBASIC4.13□□□□□ -1.75
NDE1Q9NXR1 AP000919.1-202ENST00000581139 1264 ntBASIC4.13□□□□□ -1.75
NDE1Q9NXR1 OR7E18P-201ENST00000592589 702 ntBASIC4.13□□□□□ -1.75
NDE1Q9NXR1 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.13□□□□□ -1.75
NDE1Q9NXR1 AL512782.1-201ENST00000603093 364 ntBASIC4.13□□□□□ -1.75
NDE1Q9NXR1 AL121612.2-201ENST00000612261 482 ntBASIC4.13□□□□□ -1.75
NDE1Q9NXR1 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.13□□□□□ -1.75
NDE1Q9NXR1 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.13□□□□□ -1.75
NDE1Q9NXR1 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.13□□□□□ -1.75
NDE1Q9NXR1 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.13□□□□□ -1.75
NDE1Q9NXR1 AC013437.2-201ENST00000639587 677 ntBASIC4.13□□□□□ -1.75
NDE1Q9NXR1 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.13□□□□□ -1.75
NDE1Q9NXR1 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NDE1Q9NXR1 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
NDE1Q9NXR1 AC010300.1-201ENST00000600671 5134 ntBASIC4.12□□□□□ -1.75
NDE1Q9NXR1 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.12□□□□□ -1.75
NDE1Q9NXR1 AC106754.1-201ENST00000562632 1513 ntBASIC4.12□□□□□ -1.75
NDE1Q9NXR1 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NDE1Q9NXR1 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NDE1Q9NXR1 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NDE1Q9NXR1 RNU4-4P-201ENST00000364588 130 ntBASIC4.12□□□□□ -1.75
NDE1Q9NXR1 RNU6-468P-201ENST00000384003 109 ntBASIC4.12□□□□□ -1.75
NDE1Q9NXR1 MIR3074-201ENST00000384885 81 ntBASIC4.12□□□□□ -1.75
NDE1Q9NXR1 AC093162.1-201ENST00000419682 124 ntBASIC4.12□□□□□ -1.75
NDE1Q9NXR1 TCEA1P2-201ENST00000420496 906 ntBASIC4.12□□□□□ -1.75
NDE1Q9NXR1 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.12□□□□□ -1.75
NDE1Q9NXR1 AL355433.1-201ENST00000422804 300 ntBASIC4.12□□□□□ -1.75
NDE1Q9NXR1 MTCO2P23-201ENST00000425216 680 ntBASIC4.12□□□□□ -1.75
NDE1Q9NXR1 AC005189.1-201ENST00000431286 310 ntBASIC4.12□□□□□ -1.75
NDE1Q9NXR1 ATP5HP2-201ENST00000433885 485 ntBASIC4.12□□□□□ -1.75
NDE1Q9NXR1 CEACAMP1-201ENST00000434624 1035 ntBASIC4.12□□□□□ -1.75
NDE1Q9NXR1 PPIAP17-201ENST00000438507 471 ntBASIC4.12□□□□□ -1.75
NDE1Q9NXR1 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.12□□□□□ -1.75
NDE1Q9NXR1 AC004854.1-201ENST00000440356 349 ntBASIC4.12□□□□□ -1.75
NDE1Q9NXR1 CYCSP42-201ENST00000450823 238 ntBASIC4.12□□□□□ -1.75
NDE1Q9NXR1 S100A11P1-201ENST00000477525 312 ntBASIC4.12□□□□□ -1.75
NDE1Q9NXR1 BX284632.1-201ENST00000478218 541 ntBASIC4.12□□□□□ -1.75
NDE1Q9NXR1 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.12□□□□□ -1.75
NDE1Q9NXR1 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.12□□□□□ -1.75
NDE1Q9NXR1 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.12□□□□□ -1.75
NDE1Q9NXR1 ATP1B1P1-201ENST00000509767 915 ntBASIC4.12□□□□□ -1.75
NDE1Q9NXR1 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.12□□□□□ -1.75
NDE1Q9NXR1 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.12□□□□□ -1.75
NDE1Q9NXR1 RN7SKP276-201ENST00000516242 268 ntBASIC4.12□□□□□ -1.75
NDE1Q9NXR1 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC4.12□□□□□ -1.75
NDE1Q9NXR1 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.12□□□□□ -1.75
NDE1Q9NXR1 AC087894.1-201ENST00000538359 518 ntBASIC4.12□□□□□ -1.75
NDE1Q9NXR1 AC008033.2-201ENST00000542626 177 ntBASIC4.12□□□□□ -1.75
NDE1Q9NXR1 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.12□□□□□ -1.75
NDE1Q9NXR1 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.12□□□□□ -1.75
NDE1Q9NXR1 OR6R2P-201ENST00000609216 300 ntBASIC4.12□□□□□ -1.75
NDE1Q9NXR1 AL136295.6-201ENST00000610486 658 ntBASIC4.12□□□□□ -1.75
NDE1Q9NXR1 AC064801.1-201ENST00000612025 407 ntBASIC4.12□□□□□ -1.75
NDE1Q9NXR1 MIR6891-201ENST00000618788 93 ntBASIC4.12□□□□□ -1.75
NDE1Q9NXR1 AC000123.2-201ENST00000623124 461 ntBASIC4.12□□□□□ -1.75
NDE1Q9NXR1 AC092162.3-201ENST00000624511 1624 ntBASIC4.12□□□□□ -1.75
NDE1Q9NXR1 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
NDE1Q9NXR1 AL133412.1-201ENST00000380194 2992 ntBASIC4.12□□□□□ -1.75
NDE1Q9NXR1 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NDE1Q9NXR1 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NDE1Q9NXR1 AC010928.1-201ENST00000592477 1447 ntBASIC4.12□□□□□ -1.75
NDE1Q9NXR1 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NDE1Q9NXR1 PHKBP1-201ENST00000450951 1951 ntBASIC4.11□□□□□ -1.75
NDE1Q9NXR1 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
NDE1Q9NXR1 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.11□□□□□ -1.75
NDE1Q9NXR1 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NDE1Q9NXR1 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NDE1Q9NXR1 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
NDE1Q9NXR1 MIR937-201ENST00000401271 86 ntBASIC4.11□□□□□ -1.75
NDE1Q9NXR1 HMGB3P19-201ENST00000403971 560 ntBASIC4.11□□□□□ -1.75
NDE1Q9NXR1 AL138878.1-201ENST00000405131 347 ntBASIC4.11□□□□□ -1.75
NDE1Q9NXR1 AL034374.1-201ENST00000406329 351 ntBASIC4.11□□□□□ -1.75
NDE1Q9NXR1 RNA5SP113-201ENST00000410486 84 ntBASIC4.11□□□□□ -1.75
NDE1Q9NXR1 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.11□□□□□ -1.75
NDE1Q9NXR1 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.11□□□□□ -1.75
NDE1Q9NXR1 AC008173.1-201ENST00000418901 264 ntBASIC4.11□□□□□ -1.75
NDE1Q9NXR1 AC023128.2-201ENST00000420880 1223 ntBASIC4.11□□□□□ -1.75
NDE1Q9NXR1 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC4.11□□□□□ -1.75
NDE1Q9NXR1 AC005154.2-201ENST00000438110 379 ntBASIC4.11□□□□□ -1.75
NDE1Q9NXR1 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.11□□□□□ -1.75
NDE1Q9NXR1 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.11□□□□□ -1.75
NDE1Q9NXR1 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NDE1Q9NXR1 AC073850.1-201ENST00000449243 255 ntBASIC4.11□□□□□ -1.75
NDE1Q9NXR1 AC104164.3-201ENST00000467363 1258 ntBASIC4.11□□□□□ -1.75
NDE1Q9NXR1 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.11□□□□□ -1.75
NDE1Q9NXR1 UBA52P7-201ENST00000486088 380 ntBASIC4.11□□□□□ -1.75
NDE1Q9NXR1 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.11□□□□□ -1.75
NDE1Q9NXR1 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.11□□□□□ -1.75
NDE1Q9NXR1 RPS23P1-201ENST00000491662 432 ntBASIC4.11□□□□□ -1.75
NDE1Q9NXR1 BTF3P13-201ENST00000513224 490 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms