Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.6□□□□□ -1.67
BRF2Q9HAW0 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.6□□□□□ -1.67
BRF2Q9HAW0 RN7SL802P-201ENST00000577858 299 ntBASIC4.6□□□□□ -1.67
BRF2Q9HAW0 VN1R83P-201ENST00000595685 445 ntBASIC4.6□□□□□ -1.67
BRF2Q9HAW0 BNIP3P38-201ENST00000601117 544 ntBASIC4.6□□□□□ -1.67
BRF2Q9HAW0 AC234772.3-201ENST00000602277 528 ntBASIC4.6□□□□□ -1.67
BRF2Q9HAW0 AC087763.1-201ENST00000603391 286 ntBASIC4.6□□□□□ -1.67
BRF2Q9HAW0 AL035411.2-201ENST00000604022 421 ntBASIC4.6□□□□□ -1.67
BRF2Q9HAW0 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.6□□□□□ -1.67
BRF2Q9HAW0 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.6□□□□□ -1.67
BRF2Q9HAW0 AC006963.1-201ENST00000624003 1052 ntBASIC4.6□□□□□ -1.67
BRF2Q9HAW0 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
BRF2Q9HAW0 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
BRF2Q9HAW0 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.6□□□□□ -1.67
BRF2Q9HAW0 MTND5P28-201ENST00000438005 1594 ntBASIC4.6□□□□□ -1.67
BRF2Q9HAW0 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
BRF2Q9HAW0 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
BRF2Q9HAW0 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
BRF2Q9HAW0 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
BRF2Q9HAW0 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
BRF2Q9HAW0 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
BRF2Q9HAW0 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
BRF2Q9HAW0 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
BRF2Q9HAW0 AC009951.1-201ENST00000623674 2614 ntBASIC4.59□□□□□ -1.67
BRF2Q9HAW0 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
BRF2Q9HAW0 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.59□□□□□ -1.67
BRF2Q9HAW0 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.59□□□□□ -1.67
BRF2Q9HAW0 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
BRF2Q9HAW0 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
BRF2Q9HAW0 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
BRF2Q9HAW0 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.59□□□□□ -1.67
BRF2Q9HAW0 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
BRF2Q9HAW0 NACA3P-201ENST00000359690 648 ntBASIC4.59□□□□□ -1.67
BRF2Q9HAW0 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
BRF2Q9HAW0 RNU1-83P-201ENST00000363426 164 ntBASIC4.59□□□□□ -1.67
BRF2Q9HAW0 RNU6-115P-201ENST00000364310 107 ntBASIC4.59□□□□□ -1.67
BRF2Q9HAW0 RNU6-707P-201ENST00000364647 95 ntBASIC4.59□□□□□ -1.67
BRF2Q9HAW0 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.67
BRF2Q9HAW0 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
BRF2Q9HAW0 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
BRF2Q9HAW0 ARL4AP5-201ENST00000404372 599 ntBASIC4.59□□□□□ -1.67
BRF2Q9HAW0 RNU4-34P-201ENST00000410431 124 ntBASIC4.59□□□□□ -1.67
BRF2Q9HAW0 RN7SKP229-201ENST00000410465 302 ntBASIC4.59□□□□□ -1.67
BRF2Q9HAW0 CHEK2P3-201ENST00000416118 248 ntBASIC4.59□□□□□ -1.67
BRF2Q9HAW0 HIGD1AP15-201ENST00000416198 280 ntBASIC4.59□□□□□ -1.67
BRF2Q9HAW0 AL513175.2-201ENST00000422071 443 ntBASIC4.59□□□□□ -1.67
BRF2Q9HAW0 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
BRF2Q9HAW0 RPS27P18-201ENST00000431701 247 ntBASIC4.59□□□□□ -1.67
BRF2Q9HAW0 PRPF38AP2-201ENST00000438179 851 ntBASIC4.59□□□□□ -1.67
BRF2Q9HAW0 AC108751.2-201ENST00000469993 231 ntBASIC4.59□□□□□ -1.67
BRF2Q9HAW0 RPSAP50-201ENST00000481955 852 ntBASIC4.59□□□□□ -1.67
BRF2Q9HAW0 AC008953.1-201ENST00000497334 318 ntBASIC4.59□□□□□ -1.67
BRF2Q9HAW0 AC084024.2-201ENST00000503480 791 ntBASIC4.59□□□□□ -1.67
BRF2Q9HAW0 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.59□□□□□ -1.67
BRF2Q9HAW0 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.59□□□□□ -1.67
BRF2Q9HAW0 AC011352.3-201ENST00000505162 593 ntBASIC4.59□□□□□ -1.67
BRF2Q9HAW0 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.59□□□□□ -1.67
BRF2Q9HAW0 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.59□□□□□ -1.67
BRF2Q9HAW0 RNU1-6P-201ENST00000516290 144 ntBASIC4.59□□□□□ -1.67
BRF2Q9HAW0 AF186190.1-201ENST00000517470 480 ntBASIC4.59□□□□□ -1.67
BRF2Q9HAW0 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.59□□□□□ -1.67
BRF2Q9HAW0 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC4.59□□□□□ -1.67
BRF2Q9HAW0 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.59□□□□□ -1.67
BRF2Q9HAW0 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.59□□□□□ -1.67
BRF2Q9HAW0 HMGN2P6-201ENST00000551091 273 ntBASIC4.59□□□□□ -1.67
BRF2Q9HAW0 FKBP1BP1-201ENST00000553366 325 ntBASIC4.59□□□□□ -1.67
BRF2Q9HAW0 AC074051.3-201ENST00000570238 358 ntBASIC4.59□□□□□ -1.67
BRF2Q9HAW0 MIR4458-201ENST00000578872 75 ntBASIC4.59□□□□□ -1.67
BRF2Q9HAW0 MIR5699-201ENST00000578903 90 ntBASIC4.59□□□□□ -1.67
BRF2Q9HAW0 AC067852.4-201ENST00000590314 478 ntBASIC4.59□□□□□ -1.67
BRF2Q9HAW0 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.59□□□□□ -1.67
BRF2Q9HAW0 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.59□□□□□ -1.67
BRF2Q9HAW0 AC069545.1-201ENST00000605671 358 ntBASIC4.59□□□□□ -1.67
BRF2Q9HAW0 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
BRF2Q9HAW0 AC013470.4-201ENST00000619978 986 ntBASIC4.59□□□□□ -1.67
BRF2Q9HAW0 AL356863.1-201ENST00000623378 1080 ntBASIC4.59□□□□□ -1.67
BRF2Q9HAW0 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.59□□□□□ -1.67
BRF2Q9HAW0 FAM157B-203ENST00000639350 358 ntBASIC4.59□□□□□ -1.67
BRF2Q9HAW0 MAPK10-286ENST00000641208 8747 ntBASIC4.59□□□□□ -1.67
BRF2Q9HAW0 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
BRF2Q9HAW0 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.59□□□□□ -1.68
BRF2Q9HAW0 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
BRF2Q9HAW0 ZNF33CP-201ENST00000432492 2030 ntBASIC4.58□□□□□ -1.68
BRF2Q9HAW0 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
BRF2Q9HAW0 C4BPAP1-201ENST00000415474 1893 ntBASIC4.58□□□□□ -1.68
BRF2Q9HAW0 CR788268.1-201ENST00000603931 1809 ntBASIC4.58□□□□□ -1.68
BRF2Q9HAW0 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
BRF2Q9HAW0 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
BRF2Q9HAW0 AP001273.1-201ENST00000624493 3152 ntBASIC4.58□□□□□ -1.68
BRF2Q9HAW0 Z99496.1-201ENST00000469424 1477 ntBASIC4.58□□□□□ -1.68
BRF2Q9HAW0 SALL4P2-201ENST00000423288 2910 ntBASIC4.58□□□□□ -1.68
BRF2Q9HAW0 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.58□□□□□ -1.68
BRF2Q9HAW0 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
BRF2Q9HAW0 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
BRF2Q9HAW0 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.58□□□□□ -1.68
BRF2Q9HAW0 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
BRF2Q9HAW0 RNA5SP507-201ENST00000363603 121 ntBASIC4.58□□□□□ -1.68
BRF2Q9HAW0 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.58□□□□□ -1.68
BRF2Q9HAW0 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.58□□□□□ -1.68
BRF2Q9HAW0 RNU6-413P-201ENST00000384115 107 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms