Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC004069.2-201ENST00000505438 1114 ntBASIC4.92□□□□□ -1.62
UPF2Q9HAU5 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.92□□□□□ -1.62
UPF2Q9HAU5 KRT19P6-201ENST00000510983 209 ntBASIC4.92□□□□□ -1.62
UPF2Q9HAU5 AC110760.3-202ENST00000515177 371 ntBASIC4.92□□□□□ -1.62
UPF2Q9HAU5 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.92□□□□□ -1.62
UPF2Q9HAU5 AC103833.1-201ENST00000517442 172 ntBASIC4.92□□□□□ -1.62
UPF2Q9HAU5 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC4.92□□□□□ -1.62
UPF2Q9HAU5 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
UPF2Q9HAU5 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.92□□□□□ -1.62
UPF2Q9HAU5 TVP23BP1-201ENST00000557500 617 ntBASIC4.92□□□□□ -1.62
UPF2Q9HAU5 CD24P2-201ENST00000565486 219 ntBASIC4.92□□□□□ -1.62
UPF2Q9HAU5 MIR4480-201ENST00000582492 71 ntBASIC4.92□□□□□ -1.62
UPF2Q9HAU5 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.92□□□□□ -1.62
UPF2Q9HAU5 AC068790.7-201ENST00000602347 528 ntBASIC4.92□□□□□ -1.62
UPF2Q9HAU5 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
UPF2Q9HAU5 AL049539.1-201ENST00000611964 459 ntBASIC4.92□□□□□ -1.62
UPF2Q9HAU5 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
UPF2Q9HAU5 AL133370.2-201ENST00000619934 439 ntBASIC4.92□□□□□ -1.62
UPF2Q9HAU5 AC124312.6-202ENST00000623624 418 ntBASIC4.92□□□□□ -1.62
UPF2Q9HAU5 BMS1P21-201ENST00000634565 365 ntBASIC4.92□□□□□ -1.62
UPF2Q9HAU5 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.92□□□□□ -1.62
UPF2Q9HAU5 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
UPF2Q9HAU5 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
UPF2Q9HAU5 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
UPF2Q9HAU5 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.92□□□□□ -1.62
UPF2Q9HAU5 AL627171.1-201ENST00000618845 1308 ntBASIC4.92□□□□□ -1.62
UPF2Q9HAU5 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
UPF2Q9HAU5 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
UPF2Q9HAU5 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
UPF2Q9HAU5 AL356489.2-201ENST00000566968 3528 ntBASIC4.91□□□□□ -1.62
UPF2Q9HAU5 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.91□□□□□ -1.62
UPF2Q9HAU5 SNORD115-48-201ENST00000364764 76 ntBASIC4.91□□□□□ -1.62
UPF2Q9HAU5 RNU6-609P-201ENST00000365459 107 ntBASIC4.91□□□□□ -1.62
UPF2Q9HAU5 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
UPF2Q9HAU5 MIR129-1-201ENST00000384972 72 ntBASIC4.91□□□□□ -1.62
UPF2Q9HAU5 HMGN2P8-201ENST00000391458 268 ntBASIC4.91□□□□□ -1.62
UPF2Q9HAU5 AL035419.1-201ENST00000397037 564 ntBASIC4.91□□□□□ -1.62
UPF2Q9HAU5 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.91□□□□□ -1.62
UPF2Q9HAU5 MTND4P11-201ENST00000417020 1058 ntBASIC4.91□□□□□ -1.62
UPF2Q9HAU5 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
UPF2Q9HAU5 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC4.91□□□□□ -1.62
UPF2Q9HAU5 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.91□□□□□ -1.62
UPF2Q9HAU5 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.91□□□□□ -1.62
UPF2Q9HAU5 AC069277.2-201ENST00000454211 432 ntBASIC4.91□□□□□ -1.62
UPF2Q9HAU5 MTCO3P20-201ENST00000454926 688 ntBASIC4.91□□□□□ -1.62
UPF2Q9HAU5 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
UPF2Q9HAU5 MTND2P28-201ENST00000457540 1044 ntBASIC4.91□□□□□ -1.62
UPF2Q9HAU5 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.91□□□□□ -1.62
UPF2Q9HAU5 RNA5SP246-201ENST00000458909 119 ntBASIC4.91□□□□□ -1.62
UPF2Q9HAU5 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.91□□□□□ -1.62
UPF2Q9HAU5 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.91□□□□□ -1.62
UPF2Q9HAU5 MTCO1P31-201ENST00000506355 492 ntBASIC4.91□□□□□ -1.62
UPF2Q9HAU5 SNORA76.2-201ENST00000517095 137 ntBASIC4.91□□□□□ -1.62
UPF2Q9HAU5 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.91□□□□□ -1.62
UPF2Q9HAU5 AP001372.4-201ENST00000524889 472 ntBASIC4.91□□□□□ -1.62
UPF2Q9HAU5 OR8X1P-201ENST00000534542 869 ntBASIC4.91□□□□□ -1.62
UPF2Q9HAU5 AC092851.1-201ENST00000535964 478 ntBASIC4.91□□□□□ -1.62
UPF2Q9HAU5 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.91□□□□□ -1.62
UPF2Q9HAU5 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.91□□□□□ -1.62
UPF2Q9HAU5 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.91□□□□□ -1.62
UPF2Q9HAU5 MIR5684-201ENST00000585074 65 ntBASIC4.91□□□□□ -1.62
UPF2Q9HAU5 SNX6P1-201ENST00000601728 1224 ntBASIC4.91□□□□□ -1.62
UPF2Q9HAU5 AC090772.4-201ENST00000623599 362 ntBASIC4.91□□□□□ -1.62
UPF2Q9HAU5 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC4.91□□□□□ -1.62
UPF2Q9HAU5 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
UPF2Q9HAU5 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.91□□□□□ -1.62
UPF2Q9HAU5 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
UPF2Q9HAU5 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.9□□□□□ -1.62
UPF2Q9HAU5 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.9□□□□□ -1.62
UPF2Q9HAU5 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.9□□□□□ -1.62
UPF2Q9HAU5 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
UPF2Q9HAU5 RNU6-1251P-201ENST00000364502 107 ntBASIC4.9□□□□□ -1.63
UPF2Q9HAU5 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
UPF2Q9HAU5 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
UPF2Q9HAU5 RNU6-925P-201ENST00000384629 104 ntBASIC4.9□□□□□ -1.63
UPF2Q9HAU5 Z86062.1-201ENST00000406773 777 ntBASIC4.9□□□□□ -1.63
UPF2Q9HAU5 SNORA11B-201ENST00000408175 129 ntBASIC4.9□□□□□ -1.63
UPF2Q9HAU5 RNU4-25P-201ENST00000410569 230 ntBASIC4.9□□□□□ -1.63
UPF2Q9HAU5 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.9□□□□□ -1.63
UPF2Q9HAU5 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.9□□□□□ -1.63
UPF2Q9HAU5 AL590609.2-201ENST00000421430 368 ntBASIC4.9□□□□□ -1.63
UPF2Q9HAU5 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC4.9□□□□□ -1.63
UPF2Q9HAU5 AC022022.1-201ENST00000430304 178 ntBASIC4.9□□□□□ -1.63
UPF2Q9HAU5 AL358472.1-201ENST00000431295 329 ntBASIC4.9□□□□□ -1.63
UPF2Q9HAU5 AL512661.1-201ENST00000434586 1253 ntBASIC4.9□□□□□ -1.63
UPF2Q9HAU5 CCRL1P1-201ENST00000449542 1053 ntBASIC4.9□□□□□ -1.63
UPF2Q9HAU5 AC239809.1-201ENST00000450470 217 ntBASIC4.9□□□□□ -1.63
UPF2Q9HAU5 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.9□□□□□ -1.63
UPF2Q9HAU5 AC092691.2-201ENST00000461787 803 ntBASIC4.9□□□□□ -1.63
UPF2Q9HAU5 RN7SL93P-201ENST00000463035 293 ntBASIC4.9□□□□□ -1.63
UPF2Q9HAU5 AC093663.2-201ENST00000484625 313 ntBASIC4.9□□□□□ -1.63
UPF2Q9HAU5 RN7SL691P-201ENST00000494487 301 ntBASIC4.9□□□□□ -1.63
UPF2Q9HAU5 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.63
UPF2Q9HAU5 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.9□□□□□ -1.63
UPF2Q9HAU5 AC068339.2-201ENST00000534395 618 ntBASIC4.9□□□□□ -1.63
UPF2Q9HAU5 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
UPF2Q9HAU5 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.9□□□□□ -1.63
UPF2Q9HAU5 AC104072.1-201ENST00000568817 668 ntBASIC4.9□□□□□ -1.63
UPF2Q9HAU5 RPL12P25-202ENST00000598100 674 ntBASIC4.9□□□□□ -1.63
UPF2Q9HAU5 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms