Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 RNPC3-208ENST00000533099 3641 ntAPPRIS P2 TSL 5 BASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 AP002364.1-201ENST00000623330 3386 ntBASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 EFCAB7-201ENST00000371088 2313 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 RNA5SP375-201ENST00000362975 119 ntBASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 Y_RNA.252-201ENST00000364556 101 ntBASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 Y_RNA.288-201ENST00000364854 92 ntBASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 Y_RNA.350-201ENST00000365409 98 ntBASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 RNU6-996P-201ENST00000365438 107 ntBASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 RNU6-187P-201ENST00000384139 106 ntBASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 SOD2P1-201ENST00000396543 562 ntBASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 AL109941.1-201ENST00000401925 229 ntBASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 MIR320C1-201ENST00000408566 88 ntBASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 BOLA3P4-201ENST00000418151 400 ntBASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 AL662874.1-201ENST00000426065 230 ntBASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 AC104651.2-201ENST00000447549 528 ntBASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 HSPE1P22-201ENST00000456856 327 ntBASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 SLC25A51P1-201ENST00000468432 871 ntBASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 MED28P2-201ENST00000475771 317 ntBASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 RPL5P22-201ENST00000480199 884 ntBASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 RN7SL547P-201ENST00000490793 290 ntBASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 AP001922.4-201ENST00000526967 290 ntBASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 IMMP1LP2-201ENST00000552954 492 ntBASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 BNIP3P16-201ENST00000589779 534 ntBASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 DLEU1_1.1-201ENST00000618107 190 ntBASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 AC243312.2-201ENST00000623340 601 ntBASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 LAX1-203ENST00000442561 3023 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 AL109918.1-201ENST00000602367 3039 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL25A1Q9BXS0 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
COL25A1Q9BXS0 AC110998.1-201ENST00000519029 2053 ntBASIC6.46□□□□□ -1.37
COL25A1Q9BXS0 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC6.46□□□□□ -1.37
COL25A1Q9BXS0 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC6.46□□□□□ -1.37
COL25A1Q9BXS0 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
COL25A1Q9BXS0 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
COL25A1Q9BXS0 AC015871.3-201ENST00000618835 2261 ntBASIC6.46□□□□□ -1.37
COL25A1Q9BXS0 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 RNU6-1097P-201ENST00000363586 107 ntBASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 Y_RNA.373-201ENST00000365600 103 ntBASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 Y_RNA.645-201ENST00000391229 102 ntBASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 AL445529.1-201ENST00000398713 389 ntBASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 HMGB1P20-201ENST00000402555 677 ntBASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 BTBD10P2-201ENST00000404779 676 ntBASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 RNU4-6P-201ENST00000410804 122 ntBASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 AC243428.1-201ENST00000421099 264 ntBASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 UQCRBP1-201ENST00000421129 336 ntBASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 AL356010.1-201ENST00000456364 102 ntBASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 RPS4XP1-201ENST00000482189 787 ntBASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 AC072052.1-201ENST00000496556 306 ntBASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 AK3P4-201ENST00000504283 583 ntBASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 LIAS-206ENST00000513731 826 ntTSL 5 BASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 RNU6-1088P-201ENST00000516850 104 ntBASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 RNU6-182P-201ENST00000516970 105 ntBASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 IGLVVI-25-1-201ENST00000521893 249 ntBASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 AP001804.3-201ENST00000525146 880 ntBASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms