Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 RPL23AP1-201ENST00000428990 471 ntBASIC5.48□□□□□ -1.53
SALL3Q9BXA9 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 AL445567.1-201ENST00000439121 144 ntBASIC5.48□□□□□ -1.53
SALL3Q9BXA9 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 AC105918.1-201ENST00000474399 838 ntBASIC5.48□□□□□ -1.53
SALL3Q9BXA9 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 AP003461.1-201ENST00000528866 78 ntBASIC5.48□□□□□ -1.53
SALL3Q9BXA9 AC105233.3-201ENST00000531125 744 ntBASIC5.48□□□□□ -1.53
SALL3Q9BXA9 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 AC087897.1-201ENST00000550134 156 ntBASIC5.48□□□□□ -1.53
SALL3Q9BXA9 AC068831.4-201ENST00000556118 109 ntBASIC5.48□□□□□ -1.53
SALL3Q9BXA9 AC090695.1-201ENST00000561269 1222 ntBASIC5.48□□□□□ -1.53
SALL3Q9BXA9 AC084783.1-201ENST00000565846 910 ntBASIC5.48□□□□□ -1.53
SALL3Q9BXA9 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 AP005119.2-201ENST00000579735 1105 ntBASIC5.48□□□□□ -1.53
SALL3Q9BXA9 CBX3P2-202ENST00000583365 535 ntBASIC5.48□□□□□ -1.53
SALL3Q9BXA9 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 ELOCP28-201ENST00000590044 317 ntBASIC5.48□□□□□ -1.53
SALL3Q9BXA9 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.48□□□□□ -1.53
SALL3Q9BXA9 AC100827.5-201ENST00000615883 426 ntBASIC5.48□□□□□ -1.53
SALL3Q9BXA9 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 AC091905.2-201ENST00000623143 306 ntBASIC5.48□□□□□ -1.53
SALL3Q9BXA9 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 AC006484.1-201ENST00000435086 1884 ntBASIC5.48□□□□□ -1.53
SALL3Q9BXA9 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.48□□□□□ -1.53
SALL3Q9BXA9 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.48□□□□□ -1.53
SALL3Q9BXA9 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 AC107068.1-201ENST00000563286 4218 ntBASIC5.48□□□□□ -1.53
SALL3Q9BXA9 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 AL356473.1-201ENST00000406203 1408 ntBASIC5.48□□□□□ -1.53
SALL3Q9BXA9 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 RNU4-51P-201ENST00000364206 140 ntBASIC5.48□□□□□ -1.53
SALL3Q9BXA9 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 SNORD116-12-201ENST00000384468 92 ntBASIC5.48□□□□□ -1.53
SALL3Q9BXA9 MIR129-1-201ENST00000384972 72 ntBASIC5.48□□□□□ -1.53
SALL3Q9BXA9 HMGB1P10-201ENST00000395823 563 ntBASIC5.48□□□□□ -1.53
SALL3Q9BXA9 RPL23AP59-201ENST00000399415 461 ntBASIC5.48□□□□□ -1.53
SALL3Q9BXA9 RAP1BP1-201ENST00000412709 553 ntBASIC5.48□□□□□ -1.53
SALL3Q9BXA9 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 UQCRBP1-201ENST00000421129 336 ntBASIC5.48□□□□□ -1.53
SALL3Q9BXA9 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 FTH1P16-201ENST00000435241 552 ntBASIC5.48□□□□□ -1.53
SALL3Q9BXA9 NPM1P33-201ENST00000438918 872 ntBASIC5.48□□□□□ -1.53
SALL3Q9BXA9 PTGES3P1-201ENST00000439531 483 ntBASIC5.48□□□□□ -1.53
SALL3Q9BXA9 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 AC053481.1-201ENST00000467217 306 ntBASIC5.48□□□□□ -1.53
SALL3Q9BXA9 AC006463.2-201ENST00000473326 348 ntBASIC5.48□□□□□ -1.53
SALL3Q9BXA9 AC021087.2-201ENST00000504656 1203 ntBASIC5.48□□□□□ -1.53
SALL3Q9BXA9 AC111000.2-201ENST00000507775 550 ntBASIC5.48□□□□□ -1.53
SALL3Q9BXA9 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.48□□□□□ -1.53
SALL3Q9BXA9 NDUFS5P6-201ENST00000529136 295 ntBASIC5.48□□□□□ -1.53
SALL3Q9BXA9 AC008015.1-201ENST00000555505 465 ntBASIC5.48□□□□□ -1.53
SALL3Q9BXA9 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 AL354943.1-201ENST00000572103 781 ntBASIC5.48□□□□□ -1.53
SALL3Q9BXA9 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 AC006363.1-201ENST00000603806 463 ntBASIC5.48□□□□□ -1.53
SALL3Q9BXA9 AL160290.3-201ENST00000604869 165 ntBASIC5.48□□□□□ -1.53
SALL3Q9BXA9 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 AC005021.1-201ENST00000608730 355 ntBASIC5.48□□□□□ -1.53
SALL3Q9BXA9 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 AC074140.1-201ENST00000621617 208 ntBASIC5.48□□□□□ -1.53
SALL3Q9BXA9 AC067852.7-201ENST00000623270 535 ntBASIC5.48□□□□□ -1.53
SALL3Q9BXA9 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.48□□□□□ -1.53
SALL3Q9BXA9 AC006927.3-201ENST00000638789 384 ntBASIC5.48□□□□□ -1.53
SALL3Q9BXA9 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SALL3Q9BXA9 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.47□□□□□ -1.53
SALL3Q9BXA9 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SALL3Q9BXA9 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms