Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SMOQ99835 AC073429.2-201ENST00000569694 1444 ntBASIC5.17□□□□□ -1.58
SMOQ99835 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.17□□□□□ -1.58
SMOQ99835 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SMOQ99835 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SMOQ99835 RNU6-619P-201ENST00000365146 108 ntBASIC5.17□□□□□ -1.58
SMOQ99835 RNA5SP87-201ENST00000384155 118 ntBASIC5.17□□□□□ -1.58
SMOQ99835 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SMOQ99835 AL031577.2-201ENST00000404133 280 ntBASIC5.17□□□□□ -1.58
SMOQ99835 RNA5SP345-201ENST00000410646 108 ntBASIC5.17□□□□□ -1.58
SMOQ99835 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SMOQ99835 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.17□□□□□ -1.58
SMOQ99835 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.17□□□□□ -1.58
SMOQ99835 AL022400.1-201ENST00000423946 935 ntBASIC5.17□□□□□ -1.58
SMOQ99835 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.17□□□□□ -1.58
SMOQ99835 AC007559.1-201ENST00000428736 355 ntBASIC5.17□□□□□ -1.58
SMOQ99835 RPL21P110-201ENST00000433345 446 ntBASIC5.17□□□□□ -1.58
SMOQ99835 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.17□□□□□ -1.58
SMOQ99835 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.17□□□□□ -1.58
SMOQ99835 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC5.17□□□□□ -1.58
SMOQ99835 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.17□□□□□ -1.58
SMOQ99835 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SMOQ99835 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SMOQ99835 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SMOQ99835 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.17□□□□□ -1.58
SMOQ99835 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.17□□□□□ -1.58
SMOQ99835 MTCO3P7-201ENST00000510008 774 ntBASIC5.17□□□□□ -1.58
SMOQ99835 OR7H2P-201ENST00000513483 306 ntBASIC5.17□□□□□ -1.58
SMOQ99835 HNRNPKP5-201ENST00000515300 253 ntBASIC5.17□□□□□ -1.58
SMOQ99835 RFPL1S-203ENST00000539579 330 ntBASIC5.17□□□□□ -1.58
SMOQ99835 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SMOQ99835 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.17□□□□□ -1.58
SMOQ99835 AC006349.1-201ENST00000555526 235 ntBASIC5.17□□□□□ -1.58
SMOQ99835 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC5.17□□□□□ -1.58
SMOQ99835 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.17□□□□□ -1.58
SMOQ99835 AC011260.1-201ENST00000578420 472 ntBASIC5.17□□□□□ -1.58
SMOQ99835 BPTFP1-201ENST00000579209 492 ntBASIC5.17□□□□□ -1.58
SMOQ99835 MIR4737-201ENST00000583979 81 ntBASIC5.17□□□□□ -1.58
SMOQ99835 AC103881.1-201ENST00000603476 538 ntBASIC5.17□□□□□ -1.58
SMOQ99835 AL592221.1-201ENST00000605266 382 ntBASIC5.17□□□□□ -1.58
SMOQ99835 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.17□□□□□ -1.58
SMOQ99835 AC008083.4-201ENST00000615076 444 ntBASIC5.17□□□□□ -1.58
SMOQ99835 AC100827.5-201ENST00000615883 426 ntBASIC5.17□□□□□ -1.58
SMOQ99835 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.17□□□□□ -1.58
SMOQ99835 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
SMOQ99835 AC026523.2-201ENST00000625039 7739 ntBASIC5.17□□□□□ -1.58
SMOQ99835 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SMOQ99835 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SMOQ99835 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.17□□□□□ -1.58
SMOQ99835 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SMOQ99835 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.16□□□□□ -1.58
SMOQ99835 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.16□□□□□ -1.58
SMOQ99835 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
SMOQ99835 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SMOQ99835 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SMOQ99835 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
SMOQ99835 RN7SKP103-201ENST00000363848 320 ntBASIC5.16□□□□□ -1.58
SMOQ99835 RNU4-75P-201ENST00000364621 146 ntBASIC5.16□□□□□ -1.58
SMOQ99835 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
SMOQ99835 MIR217-201ENST00000384817 110 ntBASIC5.16□□□□□ -1.58
SMOQ99835 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SMOQ99835 RNU2-22P-201ENST00000411266 212 ntBASIC5.16□□□□□ -1.58
SMOQ99835 OR51A3P-201ENST00000413596 924 ntBASIC5.16□□□□□ -1.58
SMOQ99835 ZNF736P2Y-201ENST00000416040 1279 ntBASIC5.16□□□□□ -1.58
SMOQ99835 AC013429.2-201ENST00000418798 781 ntBASIC5.16□□□□□ -1.58
SMOQ99835 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.16□□□□□ -1.58
SMOQ99835 DNAJA1P2-201ENST00000421360 1197 ntBASIC5.16□□□□□ -1.58
SMOQ99835 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SMOQ99835 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.16□□□□□ -1.58
SMOQ99835 AC244035.1-201ENST00000430042 390 ntBASIC5.16□□□□□ -1.58
SMOQ99835 AL049745.1-201ENST00000433953 286 ntBASIC5.16□□□□□ -1.58
SMOQ99835 AC092809.1-201ENST00000441469 474 ntBASIC5.16□□□□□ -1.58
SMOQ99835 CYCSP24-201ENST00000445119 316 ntBASIC5.16□□□□□ -1.58
SMOQ99835 Z80107.2-201ENST00000445127 392 ntBASIC5.16□□□□□ -1.58
SMOQ99835 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC5.16□□□□□ -1.58
SMOQ99835 AC010733.1-201ENST00000451515 401 ntBASIC5.16□□□□□ -1.58
SMOQ99835 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.16□□□□□ -1.58
SMOQ99835 AC091685.2-201ENST00000454924 864 ntBASIC5.16□□□□□ -1.58
SMOQ99835 AURKAPS2-201ENST00000454983 333 ntBASIC5.16□□□□□ -1.58
SMOQ99835 NCOR1P1-202ENST00000486162 291 ntBASIC5.16□□□□□ -1.58
SMOQ99835 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5.16□□□□□ -1.58
SMOQ99835 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SMOQ99835 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.16□□□□□ -1.58
SMOQ99835 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.16□□□□□ -1.58
SMOQ99835 AL121766.1-201ENST00000547436 487 ntBASIC5.16□□□□□ -1.58
SMOQ99835 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.16□□□□□ -1.58
SMOQ99835 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.16□□□□□ -1.58
SMOQ99835 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC5.16□□□□□ -1.58
SMOQ99835 AC012213.3-201ENST00000577199 777 ntBASIC5.16□□□□□ -1.58
SMOQ99835 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.16□□□□□ -1.58
SMOQ99835 AC009220.3-201ENST00000604318 586 ntBASIC5.16□□□□□ -1.58
SMOQ99835 AC018714.1-201ENST00000605028 208 ntBASIC5.16□□□□□ -1.58
SMOQ99835 RN7SKP299-201ENST00000606679 301 ntBASIC5.16□□□□□ -1.58
SMOQ99835 AC010424.2-201ENST00000607594 443 ntBASIC5.16□□□□□ -1.58
SMOQ99835 AL353600.1-201ENST00000608148 251 ntBASIC5.16□□□□□ -1.58
SMOQ99835 AC103591.3-201ENST00000608684 209 ntBASIC5.16□□□□□ -1.58
SMOQ99835 AC007497.1-201ENST00000610421 561 ntBASIC5.16□□□□□ -1.58
SMOQ99835 AC069209.1-201ENST00000619282 651 ntBASIC5.16□□□□□ -1.58
SMOQ99835 BX005214.3-202ENST00000619809 325 ntBASIC5.16□□□□□ -1.58
SMOQ99835 AP003072.4-201ENST00000624580 310 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms