Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
ABCA3Q99758 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
ABCA3Q99758 HMGB3P20-201ENST00000417997 600 ntBASIC4.86□□□□□ -1.63
ABCA3Q99758 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.86□□□□□ -1.63
ABCA3Q99758 AC069306.1-201ENST00000507006 843 ntBASIC4.86□□□□□ -1.63
ABCA3Q99758 RNU6-513P-201ENST00000516104 104 ntBASIC4.86□□□□□ -1.63
ABCA3Q99758 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.86□□□□□ -1.63
ABCA3Q99758 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.86□□□□□ -1.63
ABCA3Q99758 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.86□□□□□ -1.63
ABCA3Q99758 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ABCA3Q99758 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ABCA3Q99758 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
ABCA3Q99758 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ABCA3Q99758 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ABCA3Q99758 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ABCA3Q99758 AL031595.2-201ENST00000624215 19071 ntBASIC4.86□□□□□ -1.63
ABCA3Q99758 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
ABCA3Q99758 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
ABCA3Q99758 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ABCA3Q99758 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ABCA3Q99758 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.86□□□□□ -1.63
ABCA3Q99758 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ABCA3Q99758 UBE3AP2-201ENST00000429033 2259 ntBASIC4.86□□□□□ -1.63
ABCA3Q99758 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ABCA3Q99758 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ABCA3Q99758 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC4.86□□□□□ -1.63
ABCA3Q99758 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ABCA3Q99758 AC097504.1-201ENST00000515103 2415 ntBASIC4.86□□□□□ -1.63
ABCA3Q99758 AC010300.1-201ENST00000600671 5134 ntBASIC4.86□□□□□ -1.63
ABCA3Q99758 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.86□□□□□ -1.63
ABCA3Q99758 LIPT1P1-201ENST00000415870 1186 ntBASIC4.86□□□□□ -1.63
ABCA3Q99758 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.86□□□□□ -1.63
ABCA3Q99758 OR51A6P-201ENST00000418680 1004 ntBASIC4.86□□□□□ -1.63
ABCA3Q99758 AJ239321.1-201ENST00000424255 564 ntBASIC4.86□□□□□ -1.63
ABCA3Q99758 RPL26P28-201ENST00000451325 435 ntBASIC4.86□□□□□ -1.63
ABCA3Q99758 RPL21P13-201ENST00000488305 481 ntBASIC4.86□□□□□ -1.63
ABCA3Q99758 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.86□□□□□ -1.63
ABCA3Q99758 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.86□□□□□ -1.63
ABCA3Q99758 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.86□□□□□ -1.63
ABCA3Q99758 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
ABCA3Q99758 AC069209.1-201ENST00000619282 651 ntBASIC4.86□□□□□ -1.63
ABCA3Q99758 MIR7154-201ENST00000620673 73 ntBASIC4.86□□□□□ -1.63
ABCA3Q99758 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.86□□□□□ -1.63
ABCA3Q99758 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ABCA3Q99758 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC4.85□□□□□ -1.63
ABCA3Q99758 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC4.85□□□□□ -1.63
ABCA3Q99758 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.85□□□□□ -1.63
ABCA3Q99758 AL357075.1-201ENST00000404107 726 ntBASIC4.85□□□□□ -1.63
ABCA3Q99758 FTH1P9-201ENST00000513251 355 ntBASIC4.85□□□□□ -1.63
ABCA3Q99758 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.85□□□□□ -1.63
ABCA3Q99758 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.85□□□□□ -1.63
ABCA3Q99758 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.85□□□□□ -1.63
ABCA3Q99758 U4.6-201ENST00000621618 127 ntBASIC4.85□□□□□ -1.63
ABCA3Q99758 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ABCA3Q99758 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
ABCA3Q99758 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.84□□□□□ -1.63
ABCA3Q99758 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
ABCA3Q99758 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
ABCA3Q99758 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
ABCA3Q99758 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
ABCA3Q99758 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
ABCA3Q99758 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
ABCA3Q99758 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
ABCA3Q99758 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
ABCA3Q99758 RN7SKP284-201ENST00000411002 343 ntBASIC4.84□□□□□ -1.63
ABCA3Q99758 AC017079.2-201ENST00000416102 485 ntBASIC4.84□□□□□ -1.63
ABCA3Q99758 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.84□□□□□ -1.63
ABCA3Q99758 RPL32P34-201ENST00000486380 400 ntBASIC4.84□□□□□ -1.63
ABCA3Q99758 AC096576.1-201ENST00000489014 359 ntBASIC4.84□□□□□ -1.63
ABCA3Q99758 Vault.1-201ENST00000516474 102 ntBASIC4.84□□□□□ -1.63
ABCA3Q99758 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.84□□□□□ -1.63
ABCA3Q99758 AC005476.1-201ENST00000554427 397 ntBASIC4.84□□□□□ -1.63
ABCA3Q99758 MIR5680-201ENST00000577577 84 ntBASIC4.84□□□□□ -1.63
ABCA3Q99758 AL606834.2-201ENST00000602954 668 ntBASIC4.84□□□□□ -1.63
ABCA3Q99758 ATE1-AS1-202ENST00000636460 506 ntBASIC4.84□□□□□ -1.63
ABCA3Q99758 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
ABCA3Q99758 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.84□□□□□ -1.63
ABCA3Q99758 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
ABCA3Q99758 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
ABCA3Q99758 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
ABCA3Q99758 RN7SKP53-201ENST00000411337 315 ntBASIC4.83□□□□□ -1.64
ABCA3Q99758 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.83□□□□□ -1.64
ABCA3Q99758 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.83□□□□□ -1.64
ABCA3Q99758 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.83□□□□□ -1.64
ABCA3Q99758 AC025750.2-201ENST00000442609 450 ntBASIC4.83□□□□□ -1.64
ABCA3Q99758 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.83□□□□□ -1.64
ABCA3Q99758 MTND6P32-201ENST00000457611 483 ntBASIC4.83□□□□□ -1.64
ABCA3Q99758 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.83□□□□□ -1.64
ABCA3Q99758 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.83□□□□□ -1.64
ABCA3Q99758 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.83□□□□□ -1.64
ABCA3Q99758 AC090877.1-201ENST00000561418 344 ntBASIC4.83□□□□□ -1.64
ABCA3Q99758 MIR4276-201ENST00000584832 70 ntBASIC4.83□□□□□ -1.64
ABCA3Q99758 AL390816.3-201ENST00000604527 1066 ntBASIC4.83□□□□□ -1.64
ABCA3Q99758 AC006386.2-201ENST00000624491 75 ntBASIC4.83□□□□□ -1.64
ABCA3Q99758 AC012005.1-201ENST00000624575 75 ntBASIC4.83□□□□□ -1.64
ABCA3Q99758 AC119674.1-212ENST00000641155 993 ntBASIC4.83□□□□□ -1.64
ABCA3Q99758 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
ABCA3Q99758 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
ABCA3Q99758 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
ABCA3Q99758 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms