Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
AP1S3Q96PC3 ZNF826P-207ENST00000622273 1910 ntBASIC2.95□□□□□ -1.94
AP1S3Q96PC3 UBE3AP2-201ENST00000429033 2259 ntBASIC2.95□□□□□ -1.94
AP1S3Q96PC3 RARSP1-201ENST00000542842 1418 ntBASIC2.95□□□□□ -1.94
AP1S3Q96PC3 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
AP1S3Q96PC3 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
AP1S3Q96PC3 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
AP1S3Q96PC3 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
AP1S3Q96PC3 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
AP1S3Q96PC3 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
AP1S3Q96PC3 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.95□□□□□ -1.94
AP1S3Q96PC3 SPTLC1P2-201ENST00000407089 121 ntBASIC2.95□□□□□ -1.94
AP1S3Q96PC3 RNU4-25P-201ENST00000410569 230 ntBASIC2.95□□□□□ -1.94
AP1S3Q96PC3 RN7SKP235-201ENST00000410662 305 ntBASIC2.95□□□□□ -1.94
AP1S3Q96PC3 RNU2-37P-201ENST00000410695 177 ntBASIC2.95□□□□□ -1.94
AP1S3Q96PC3 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
AP1S3Q96PC3 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC2.95□□□□□ -1.94
AP1S3Q96PC3 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
AP1S3Q96PC3 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC2.95□□□□□ -1.94
AP1S3Q96PC3 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC2.95□□□□□ -1.94
AP1S3Q96PC3 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC2.95□□□□□ -1.94
AP1S3Q96PC3 RPL7P61-201ENST00000451721 751 ntBASIC2.95□□□□□ -1.94
AP1S3Q96PC3 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC2.95□□□□□ -1.94
AP1S3Q96PC3 RPL7P1-201ENST00000468161 747 ntBASIC2.95□□□□□ -1.94
AP1S3Q96PC3 RPL7P9-201ENST00000468715 747 ntBASIC2.95□□□□□ -1.94
AP1S3Q96PC3 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC2.95□□□□□ -1.94
AP1S3Q96PC3 KRTAP5-14P-201ENST00000502328 121 ntBASIC2.95□□□□□ -1.94
AP1S3Q96PC3 OR5M14P-201ENST00000506803 618 ntBASIC2.95□□□□□ -1.94
AP1S3Q96PC3 AC026726.1-201ENST00000512859 601 ntBASIC2.95□□□□□ -1.94
AP1S3Q96PC3 PHBP14-201ENST00000512887 367 ntBASIC2.95□□□□□ -1.94
AP1S3Q96PC3 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC2.95□□□□□ -1.94
AP1S3Q96PC3 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC2.95□□□□□ -1.94
AP1S3Q96PC3 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC2.95□□□□□ -1.94
AP1S3Q96PC3 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC2.95□□□□□ -1.94
AP1S3Q96PC3 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC2.95□□□□□ -1.94
AP1S3Q96PC3 AC008011.1-201ENST00000545989 227 ntBASIC2.95□□□□□ -1.94
AP1S3Q96PC3 AC063949.1-201ENST00000552900 865 ntBASIC2.95□□□□□ -1.94
AP1S3Q96PC3 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC2.95□□□□□ -1.94
AP1S3Q96PC3 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC2.95□□□□□ -1.94
AP1S3Q96PC3 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC2.95□□□□□ -1.94
AP1S3Q96PC3 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC2.95□□□□□ -1.94
AP1S3Q96PC3 MIR5684-201ENST00000585074 65 ntBASIC2.95□□□□□ -1.94
AP1S3Q96PC3 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC2.95□□□□□ -1.94
AP1S3Q96PC3 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC2.95□□□□□ -1.94
AP1S3Q96PC3 SDR42E1P1-201ENST00000611327 477 ntBASIC2.95□□□□□ -1.94
AP1S3Q96PC3 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC2.95□□□□□ -1.94
AP1S3Q96PC3 AC016957.2-201ENST00000616998 848 ntBASIC2.95□□□□□ -1.94
AP1S3Q96PC3 AL445528.2-201ENST00000620582 470 ntBASIC2.95□□□□□ -1.94
AP1S3Q96PC3 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
AP1S3Q96PC3 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC2.95□□□□□ -1.94
AP1S3Q96PC3 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
AP1S3Q96PC3 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC2.95□□□□□ -1.94
AP1S3Q96PC3 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
AP1S3Q96PC3 CIR1P2-201ENST00000514821 1342 ntBASIC2.94□□□□□ -1.94
AP1S3Q96PC3 DCAF13P3-201ENST00000561147 1334 ntBASIC2.94□□□□□ -1.94
AP1S3Q96PC3 AC116667.1-201ENST00000604855 2072 ntBASIC2.94□□□□□ -1.94
AP1S3Q96PC3 CR788268.1-201ENST00000603931 1809 ntBASIC2.94□□□□□ -1.94
AP1S3Q96PC3 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.94□□□□□ -1.94
AP1S3Q96PC3 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
AP1S3Q96PC3 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
AP1S3Q96PC3 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
AP1S3Q96PC3 PTMAP5-201ENST00000393073 333 ntBASIC2.94□□□□□ -1.94
AP1S3Q96PC3 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
AP1S3Q96PC3 SEPT7P2-202ENST00000398921 823 ntBASIC2.94□□□□□ -1.94
AP1S3Q96PC3 NAP1L1P2-201ENST00000414182 1089 ntBASIC2.94□□□□□ -1.94
AP1S3Q96PC3 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
AP1S3Q96PC3 NPM1P24-201ENST00000428039 894 ntBASIC2.94□□□□□ -1.94
AP1S3Q96PC3 FTH1P16-201ENST00000435241 552 ntBASIC2.94□□□□□ -1.94
AP1S3Q96PC3 RPL12P3-201ENST00000440080 396 ntBASIC2.94□□□□□ -1.94
AP1S3Q96PC3 RPL36AP15-201ENST00000444514 266 ntBASIC2.94□□□□□ -1.94
AP1S3Q96PC3 MTND2P28-201ENST00000457540 1044 ntBASIC2.94□□□□□ -1.94
AP1S3Q96PC3 RNA5SP246-201ENST00000458909 119 ntBASIC2.94□□□□□ -1.94
AP1S3Q96PC3 AC109327.1-201ENST00000471666 403 ntBASIC2.94□□□□□ -1.94
AP1S3Q96PC3 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
AP1S3Q96PC3 AC026784.1-201ENST00000507986 352 ntBASIC2.94□□□□□ -1.94
AP1S3Q96PC3 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC2.94□□□□□ -1.94
AP1S3Q96PC3 ARL2BPP6-201ENST00000512757 439 ntBASIC2.94□□□□□ -1.94
AP1S3Q96PC3 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC2.94□□□□□ -1.94
AP1S3Q96PC3 AC025260.1-201ENST00000548858 430 ntBASIC2.94□□□□□ -1.94
AP1S3Q96PC3 C1GALT1P1-201ENST00000548895 1089 ntBASIC2.94□□□□□ -1.94
AP1S3Q96PC3 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC2.94□□□□□ -1.94
AP1S3Q96PC3 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
AP1S3Q96PC3 TVP23BP1-201ENST00000557500 617 ntBASIC2.94□□□□□ -1.94
AP1S3Q96PC3 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC2.94□□□□□ -1.94
AP1S3Q96PC3 ZNF192P1-203ENST00000565888 810 ntBASIC2.94□□□□□ -1.94
AP1S3Q96PC3 AC022968.1-201ENST00000567372 442 ntBASIC2.94□□□□□ -1.94
AP1S3Q96PC3 AC025627.2-201ENST00000576220 160 ntBASIC2.94□□□□□ -1.94
AP1S3Q96PC3 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
AP1S3Q96PC3 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC2.94□□□□□ -1.94
AP1S3Q96PC3 AC011816.2-201ENST00000607089 556 ntBASIC2.94□□□□□ -1.94
AP1S3Q96PC3 AC133644.2-201ENST00000608142 540 ntBASIC2.94□□□□□ -1.94
AP1S3Q96PC3 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC2.94□□□□□ -1.94
AP1S3Q96PC3 AC006946.3-201ENST00000609791 756 ntBASIC2.94□□□□□ -1.94
AP1S3Q96PC3 MIR7155-201ENST00000615925 56 ntBASIC2.94□□□□□ -1.94
AP1S3Q96PC3 AC016769.4-201ENST00000616893 535 ntBASIC2.94□□□□□ -1.94
AP1S3Q96PC3 AC090510.2-201ENST00000617465 629 ntBASIC2.94□□□□□ -1.94
AP1S3Q96PC3 XIST_intron.1-201ENST00000619444 68 ntBASIC2.94□□□□□ -1.94
AP1S3Q96PC3 MIR6886-201ENST00000619864 61 ntBASIC2.94□□□□□ -1.94
AP1S3Q96PC3 AC124312.6-202ENST00000623624 418 ntBASIC2.94□□□□□ -1.94
AP1S3Q96PC3 AP003497.2-201ENST00000624220 967 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms