Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.04□□□□□ -1.76
RFT1Q96AA3 HLA-N-201ENST00000437516 135 ntBASIC4.04□□□□□ -1.76
RFT1Q96AA3 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.04□□□□□ -1.76
RFT1Q96AA3 AC073850.1-201ENST00000449243 255 ntBASIC4.04□□□□□ -1.76
RFT1Q96AA3 AC079168.2-201ENST00000453977 416 ntBASIC4.04□□□□□ -1.76
RFT1Q96AA3 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.04□□□□□ -1.76
RFT1Q96AA3 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC4.04□□□□□ -1.76
RFT1Q96AA3 RNU7-140P-201ENST00000459546 60 ntBASIC4.04□□□□□ -1.76
RFT1Q96AA3 HMGB1P38-201ENST00000490557 577 ntBASIC4.04□□□□□ -1.76
RFT1Q96AA3 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RFT1Q96AA3 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.04□□□□□ -1.76
RFT1Q96AA3 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.04□□□□□ -1.76
RFT1Q96AA3 RNA5SP34-201ENST00000516887 130 ntBASIC4.04□□□□□ -1.76
RFT1Q96AA3 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.04□□□□□ -1.76
RFT1Q96AA3 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.04□□□□□ -1.76
RFT1Q96AA3 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.04□□□□□ -1.76
RFT1Q96AA3 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.04□□□□□ -1.76
RFT1Q96AA3 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.04□□□□□ -1.76
RFT1Q96AA3 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.04□□□□□ -1.76
RFT1Q96AA3 CYP4A43P-201ENST00000568156 121 ntBASIC4.04□□□□□ -1.76
RFT1Q96AA3 MTCO1P40-201ENST00000574371 625 ntBASIC4.04□□□□□ -1.76
RFT1Q96AA3 RN7SL802P-201ENST00000577858 299 ntBASIC4.04□□□□□ -1.76
RFT1Q96AA3 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.04□□□□□ -1.76
RFT1Q96AA3 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.04□□□□□ -1.76
RFT1Q96AA3 AC099785.1-201ENST00000605697 437 ntBASIC4.04□□□□□ -1.76
RFT1Q96AA3 AP002802.2-201ENST00000605877 235 ntBASIC4.04□□□□□ -1.76
RFT1Q96AA3 OR7A19P-201ENST00000608051 733 ntBASIC4.04□□□□□ -1.76
RFT1Q96AA3 AC013468.1-201ENST00000608680 598 ntBASIC4.04□□□□□ -1.76
RFT1Q96AA3 AP001521.2-201ENST00000608772 546 ntBASIC4.04□□□□□ -1.76
RFT1Q96AA3 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.04□□□□□ -1.76
RFT1Q96AA3 MIR6729-201ENST00000618194 65 ntBASIC4.04□□□□□ -1.76
RFT1Q96AA3 AC022079.2-201ENST00000619739 566 ntBASIC4.04□□□□□ -1.76
RFT1Q96AA3 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.04□□□□□ -1.76
RFT1Q96AA3 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.04□□□□□ -1.76
RFT1Q96AA3 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.04□□□□□ -1.76
RFT1Q96AA3 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.04□□□□□ -1.76
RFT1Q96AA3 AL121594.5-201ENST00000631724 573 ntBASIC4.04□□□□□ -1.76
RFT1Q96AA3 AL590396.4-201ENST00000636779 956 ntBASIC4.04□□□□□ -1.76
RFT1Q96AA3 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.04□□□□□ -1.76
RFT1Q96AA3 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RFT1Q96AA3 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RFT1Q96AA3 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
RFT1Q96AA3 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.04□□□□□ -1.76
RFT1Q96AA3 AC008725.1-201ENST00000605123 2263 ntBASIC4.04□□□□□ -1.76
RFT1Q96AA3 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RFT1Q96AA3 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
RFT1Q96AA3 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RFT1Q96AA3 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
RFT1Q96AA3 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
RFT1Q96AA3 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RFT1Q96AA3 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RFT1Q96AA3 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RFT1Q96AA3 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RFT1Q96AA3 RNA5SP391-201ENST00000363456 119 ntBASIC4.03□□□□□ -1.76
RFT1Q96AA3 RNU6-353P-201ENST00000364266 108 ntBASIC4.03□□□□□ -1.76
RFT1Q96AA3 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
RFT1Q96AA3 RNU1-44P-201ENST00000384453 163 ntBASIC4.03□□□□□ -1.76
RFT1Q96AA3 AL590762.2-201ENST00000395798 571 ntBASIC4.03□□□□□ -1.76
RFT1Q96AA3 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RFT1Q96AA3 PRRC2CP1-201ENST00000404428 159 ntBASIC4.03□□□□□ -1.76
RFT1Q96AA3 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.03□□□□□ -1.76
RFT1Q96AA3 UBTFL3-201ENST00000418934 1024 ntBASIC4.03□□□□□ -1.76
RFT1Q96AA3 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RFT1Q96AA3 AL009174.1-201ENST00000426577 416 ntBASIC4.03□□□□□ -1.76
RFT1Q96AA3 AC073335.1-201ENST00000427776 363 ntBASIC4.03□□□□□ -1.76
RFT1Q96AA3 RBMY2QP-201ENST00000429799 1147 ntBASIC4.03□□□□□ -1.76
RFT1Q96AA3 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RFT1Q96AA3 HSFY7P-201ENST00000432672 318 ntBASIC4.03□□□□□ -1.76
RFT1Q96AA3 RPL7P28-201ENST00000437739 740 ntBASIC4.03□□□□□ -1.76
RFT1Q96AA3 HSFY8P-201ENST00000437934 318 ntBASIC4.03□□□□□ -1.76
RFT1Q96AA3 AC105402.2-201ENST00000438503 358 ntBASIC4.03□□□□□ -1.76
RFT1Q96AA3 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.03□□□□□ -1.76
RFT1Q96AA3 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.03□□□□□ -1.76
RFT1Q96AA3 AC233982.1-201ENST00000451247 436 ntBASIC4.03□□□□□ -1.76
RFT1Q96AA3 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.03□□□□□ -1.76
RFT1Q96AA3 HSFY5P-201ENST00000453726 309 ntBASIC4.03□□□□□ -1.76
RFT1Q96AA3 RPL21P71-201ENST00000465598 459 ntBASIC4.03□□□□□ -1.76
RFT1Q96AA3 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.03□□□□□ -1.76
RFT1Q96AA3 UBTFL6-201ENST00000477929 1024 ntBASIC4.03□□□□□ -1.76
RFT1Q96AA3 RPSAP50-201ENST00000481955 852 ntBASIC4.03□□□□□ -1.76
RFT1Q96AA3 RPS27P23-201ENST00000487608 251 ntBASIC4.03□□□□□ -1.76
RFT1Q96AA3 HMGB1P21-201ENST00000502313 581 ntBASIC4.03□□□□□ -1.76
RFT1Q96AA3 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.03□□□□□ -1.76
RFT1Q96AA3 AC006499.3-201ENST00000506077 748 ntBASIC4.03□□□□□ -1.76
RFT1Q96AA3 MTATP6P22-201ENST00000507369 598 ntBASIC4.03□□□□□ -1.76
RFT1Q96AA3 AC020593.1-201ENST00000507399 299 ntBASIC4.03□□□□□ -1.76
RFT1Q96AA3 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.03□□□□□ -1.76
RFT1Q96AA3 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.03□□□□□ -1.76
RFT1Q96AA3 BTF3P13-201ENST00000513224 490 ntBASIC4.03□□□□□ -1.76
RFT1Q96AA3 RNU6-416P-201ENST00000516265 103 ntBASIC4.03□□□□□ -1.76
RFT1Q96AA3 RN7SKP82-201ENST00000516786 223 ntBASIC4.03□□□□□ -1.76
RFT1Q96AA3 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.03□□□□□ -1.76
RFT1Q96AA3 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4.03□□□□□ -1.76
RFT1Q96AA3 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.03□□□□□ -1.76
RFT1Q96AA3 OR10G5P-201ENST00000532733 358 ntBASIC4.03□□□□□ -1.76
RFT1Q96AA3 AC006518.2-201ENST00000542513 940 ntBASIC4.03□□□□□ -1.76
RFT1Q96AA3 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.03□□□□□ -1.76
RFT1Q96AA3 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RFT1Q96AA3 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.03□□□□□ -1.76
RFT1Q96AA3 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 157.8 ms