Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 AC009313.2-201ENST00000417893 1941 ntBASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 Z98755.1-201ENST00000407015 1384 ntBASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.52□□□□□ -1.69
SLC44A1Q8WWI5 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 NSRP1P1-201ENST00000444067 1693 ntBASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 ZNF137P-201ENST00000456718 1920 ntBASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 AC021146.4-201ENST00000309229 279 ntBASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 ANKRD36P1-201ENST00000344424 659 ntBASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 RNU1-15P-201ENST00000353977 144 ntBASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 IGKV7-3-201ENST00000357453 298 ntBASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 NCSTNP1-201ENST00000406229 144 ntBASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 RNU2-50P-201ENST00000410494 143 ntBASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 AC092745.2-202ENST00000411880 369 ntBASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 RPS7P9-201ENST00000414704 586 ntBASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 COX6B1P1-201ENST00000415962 213 ntBASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 MTND4P3-201ENST00000417829 541 ntBASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 BX510359.2-201ENST00000417920 305 ntBASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 AC092634.2-201ENST00000428146 1010 ntBASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 YWHAEP5-201ENST00000431545 765 ntBASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 GTF2IP3-201ENST00000433887 494 ntBASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 USP9YP24-201ENST00000434374 697 ntBASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 AC005154.2-201ENST00000438110 379 ntBASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 AC016831.4-201ENST00000438302 307 ntBASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 AC002542.1-201ENST00000440683 193 ntBASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 USP9YP17-201ENST00000444617 696 ntBASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 AC068135.1-201ENST00000446164 246 ntBASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 CDC42P1-201ENST00000456658 548 ntBASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 RPL7P32-201ENST00000457119 744 ntBASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 AC079804.1-201ENST00000461922 436 ntBASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 RN7SL809P-201ENST00000482040 297 ntBASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 AC023050.1-201ENST00000498198 304 ntBASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 AC020699.1-201ENST00000505161 445 ntBASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 AC113420.1-201ENST00000507903 571 ntBASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 PRELID3BP4-201ENST00000515476 571 ntBASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 Y_RNA.717-201ENST00000517106 92 ntBASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 PCNPP1-201ENST00000552501 511 ntBASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 AC005084.1-201ENST00000605160 304 ntBASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 AC097520.1-201ENST00000624435 385 ntBASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 AC007390.2-201ENST00000606229 3803 ntBASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
SLC44A1Q8WWI5 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 SDHCP2-201ENST00000398565 501 ntBASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 RN7SKP100-201ENST00000411258 284 ntBASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 RPL37P18-201ENST00000411602 243 ntBASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 AL160275.2-201ENST00000412010 394 ntBASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 AL592310.1-201ENST00000414330 671 ntBASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 AC009302.1-201ENST00000417147 390 ntBASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 AC048351.1-201ENST00000420064 602 ntBASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 AL590609.2-201ENST00000421430 368 ntBASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 AC246680.2-201ENST00000422106 389 ntBASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 AL360081.1-201ENST00000428299 555 ntBASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 HLA-N-201ENST00000437516 135 ntBASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 VN1R32P-201ENST00000452234 905 ntBASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 AC244505.3-201ENST00000454598 187 ntBASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 MTND4LP2-201ENST00000502312 285 ntBASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.5□□□□□ -1.69
SLC44A1Q8WWI5 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms