Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.83□□□□□ -1.64
SNED1Q8TER0 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
SNED1Q8TER0 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.83□□□□□ -1.64
SNED1Q8TER0 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SNED1Q8TER0 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.83□□□□□ -1.64
SNED1Q8TER0 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.83□□□□□ -1.64
SNED1Q8TER0 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SNED1Q8TER0 AP004289.2-201ENST00000444413 1457 ntBASIC4.83□□□□□ -1.64
SNED1Q8TER0 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
SNED1Q8TER0 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SNED1Q8TER0 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SNED1Q8TER0 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SNED1Q8TER0 RNU6-1331P-201ENST00000363658 106 ntBASIC4.82□□□□□ -1.64
SNED1Q8TER0 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SNED1Q8TER0 RNVU1-14-201ENST00000384770 164 ntBASIC4.82□□□□□ -1.64
SNED1Q8TER0 MIR218-2-201ENST00000385006 110 ntBASIC4.82□□□□□ -1.64
SNED1Q8TER0 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SNED1Q8TER0 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SNED1Q8TER0 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.82□□□□□ -1.64
SNED1Q8TER0 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.82□□□□□ -1.64
SNED1Q8TER0 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.82□□□□□ -1.64
SNED1Q8TER0 RPL17P35-201ENST00000432217 549 ntBASIC4.82□□□□□ -1.64
SNED1Q8TER0 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC4.82□□□□□ -1.64
SNED1Q8TER0 AC115115.1-201ENST00000449927 248 ntBASIC4.82□□□□□ -1.64
SNED1Q8TER0 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.82□□□□□ -1.64
SNED1Q8TER0 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
SNED1Q8TER0 AC108729.1-201ENST00000487812 947 ntBASIC4.82□□□□□ -1.64
SNED1Q8TER0 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.82□□□□□ -1.64
SNED1Q8TER0 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.82□□□□□ -1.64
SNED1Q8TER0 AC104619.4-201ENST00000510773 249 ntBASIC4.82□□□□□ -1.64
SNED1Q8TER0 AC074250.1-201ENST00000511117 192 ntBASIC4.82□□□□□ -1.64
SNED1Q8TER0 MTATP6P9-201ENST00000515039 680 ntBASIC4.82□□□□□ -1.64
SNED1Q8TER0 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SNED1Q8TER0 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.82□□□□□ -1.64
SNED1Q8TER0 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SNED1Q8TER0 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.82□□□□□ -1.64
SNED1Q8TER0 AC022968.1-201ENST00000567372 442 ntBASIC4.82□□□□□ -1.64
SNED1Q8TER0 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.82□□□□□ -1.64
SNED1Q8TER0 SNORD39.2-201ENST00000579995 76 ntBASIC4.82□□□□□ -1.64
SNED1Q8TER0 AL391497.1-201ENST00000608671 547 ntBASIC4.82□□□□□ -1.64
SNED1Q8TER0 OR2BH1P-201ENST00000608850 864 ntBASIC4.82□□□□□ -1.64
SNED1Q8TER0 AL031666.3-201ENST00000609320 1006 ntBASIC4.82□□□□□ -1.64
SNED1Q8TER0 AL391834.2-201ENST00000609982 546 ntBASIC4.82□□□□□ -1.64
SNED1Q8TER0 AC016597.2-201ENST00000613256 341 ntBASIC4.82□□□□□ -1.64
SNED1Q8TER0 AC138907.10-201ENST00000623708 983 ntBASIC4.82□□□□□ -1.64
SNED1Q8TER0 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.82□□□□□ -1.64
SNED1Q8TER0 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SNED1Q8TER0 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SNED1Q8TER0 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
SNED1Q8TER0 AC005005.4-201ENST00000623789 16698 ntBASIC4.82□□□□□ -1.64
SNED1Q8TER0 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
SNED1Q8TER0 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
SNED1Q8TER0 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.82□□□□□ -1.64
SNED1Q8TER0 AL606537.1-201ENST00000607258 2011 ntBASIC4.82□□□□□ -1.64
SNED1Q8TER0 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
SNED1Q8TER0 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.81□□□□□ -1.64
SNED1Q8TER0 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SNED1Q8TER0 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SNED1Q8TER0 MTATP6P31-201ENST00000406985 692 ntBASIC4.81□□□□□ -1.64
SNED1Q8TER0 AL355143.1-201ENST00000407101 841 ntBASIC4.81□□□□□ -1.64
SNED1Q8TER0 AC002524.1-201ENST00000411687 547 ntBASIC4.81□□□□□ -1.64
SNED1Q8TER0 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC4.81□□□□□ -1.64
SNED1Q8TER0 RPL7P4-203ENST00000430239 730 ntBASIC4.81□□□□□ -1.64
SNED1Q8TER0 RAB9AP5-201ENST00000437794 597 ntBASIC4.81□□□□□ -1.64
SNED1Q8TER0 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.81□□□□□ -1.64
SNED1Q8TER0 AL353748.1-201ENST00000440753 474 ntBASIC4.81□□□□□ -1.64
SNED1Q8TER0 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC4.81□□□□□ -1.64
SNED1Q8TER0 RAB9AP2-201ENST00000443911 597 ntBASIC4.81□□□□□ -1.64
SNED1Q8TER0 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.81□□□□□ -1.64
SNED1Q8TER0 FABP3P2-201ENST00000453169 399 ntBASIC4.81□□□□□ -1.64
SNED1Q8TER0 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.81□□□□□ -1.64
SNED1Q8TER0 AC025181.1-201ENST00000477507 416 ntBASIC4.81□□□□□ -1.64
SNED1Q8TER0 AL358832.1-201ENST00000497800 389 ntBASIC4.81□□□□□ -1.64
SNED1Q8TER0 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.81□□□□□ -1.64
SNED1Q8TER0 CDH12P2-201ENST00000504393 298 ntBASIC4.81□□□□□ -1.64
SNED1Q8TER0 WBP1LP4-201ENST00000505043 344 ntBASIC4.81□□□□□ -1.64
SNED1Q8TER0 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.81□□□□□ -1.64
SNED1Q8TER0 NPM1P52-201ENST00000518264 846 ntBASIC4.81□□□□□ -1.64
SNED1Q8TER0 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.81□□□□□ -1.64
SNED1Q8TER0 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.81□□□□□ -1.64
SNED1Q8TER0 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.81□□□□□ -1.64
SNED1Q8TER0 RPL23AP87-202ENST00000573039 466 ntBASIC4.81□□□□□ -1.64
SNED1Q8TER0 MIR5187-201ENST00000583479 76 ntBASIC4.81□□□□□ -1.64
SNED1Q8TER0 MIR4298-201ENST00000584380 73 ntBASIC4.81□□□□□ -1.64
SNED1Q8TER0 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC4.81□□□□□ -1.64
SNED1Q8TER0 SNORA35B-201ENST00000607417 129 ntBASIC4.81□□□□□ -1.64
SNED1Q8TER0 AL391834.1-201ENST00000609609 560 ntBASIC4.81□□□□□ -1.64
SNED1Q8TER0 AL159169.2-201ENST00000610061 1269 ntBASIC4.81□□□□□ -1.64
SNED1Q8TER0 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.81□□□□□ -1.64
SNED1Q8TER0 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.81□□□□□ -1.64
SNED1Q8TER0 AC074029.4-201ENST00000624796 1859 ntBASIC4.81□□□□□ -1.64
SNED1Q8TER0 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SNED1Q8TER0 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SNED1Q8TER0 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SNED1Q8TER0 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SNED1Q8TER0 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SNED1Q8TER0 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SNED1Q8TER0 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SNED1Q8TER0 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SNED1Q8TER0 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms