Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AC073143.1-201ENST00000436316 395 ntBASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 AC002542.1-201ENST00000440683 193 ntBASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 UBE2D3P4-201ENST00000441973 436 ntBASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 AC005002.1-201ENST00000447458 540 ntBASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 AC018638.3-201ENST00000461273 132 ntBASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 RPS3AP43-201ENST00000479743 781 ntBASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 AC109462.1-201ENST00000491087 368 ntBASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 RPS4XP18-201ENST00000495480 763 ntBASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 AC140172.1-201ENST00000502928 141 ntBASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 AC084024.2-201ENST00000503480 791 ntBASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 NDUFB4P12-201ENST00000513465 390 ntBASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 PDCL2P2-201ENST00000533651 189 ntBASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 HAUS8P1-201ENST00000549005 542 ntBASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 FKBP1BP1-201ENST00000553366 325 ntBASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 AP005119.2-201ENST00000579735 1105 ntBASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 AP001542.2-201ENST00000593141 364 ntBASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 RPL26P30-202ENST00000602923 645 ntBASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 AL121932.1-201ENST00000605542 214 ntBASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 AL450489.1-201ENST00000612071 468 ntBASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 AC009163.6-201ENST00000612367 342 ntBASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 AC011939.3-201ENST00000613686 466 ntBASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 MIR6826-201ENST00000617808 98 ntBASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 AC074140.1-201ENST00000621617 208 ntBASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 AC005086.4-201ENST00000623065 213 ntBASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 AC055839.1-201ENST00000634467 498 ntBASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 AC053481.2-202ENST00000582394 1500 ntBASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.44□□□□□ -1.7
CLIP4Q8N3C7 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 AC000367.1-201ENST00000452711 1766 ntBASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 RNU1-83P-201ENST00000363426 164 ntBASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 RNU4-4P-201ENST00000364588 130 ntBASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 AL079342.2-201ENST00000403367 482 ntBASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 ARL4AP5-201ENST00000404372 599 ntBASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 RN7SKP229-201ENST00000410465 302 ntBASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 SEPT2P1-201ENST00000419651 180 ntBASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 AC093162.1-201ENST00000419682 124 ntBASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 AC011233.1-201ENST00000422812 283 ntBASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 AL645608.4-201ENST00000423619 154 ntBASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 AL390023.1-201ENST00000428836 262 ntBASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 RPS17P8-201ENST00000434525 335 ntBASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 AC093414.1-201ENST00000434712 514 ntBASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 AL445567.1-201ENST00000439121 144 ntBASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 AC092393.1-201ENST00000439625 742 ntBASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 RPS26P2-201ENST00000440331 348 ntBASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 MRPL48P1-201ENST00000445390 636 ntBASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 TDGF1P1-201ENST00000445734 527 ntBASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 AL133477.1-201ENST00000457472 514 ntBASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 RPL5P30-201ENST00000465511 891 ntBASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 AC104108.1-201ENST00000509930 412 ntBASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 OR5H4P-201ENST00000510851 923 ntBASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 HMGB3P13-201ENST00000511263 607 ntBASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 MTND4LP31-201ENST00000514859 294 ntBASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 C1GALT1P3-201ENST00000522049 819 ntBASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 AC083923.1-201ENST00000523708 376 ntBASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 AC090888.1-201ENST00000561335 1141 ntBASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.43□□□□□ -1.7
CLIP4Q8N3C7 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms